graphics/grads: Refresh MASTER_SITES

Remove dead mirrors and switch to http

Approved by:	portmgr (blanket)

*/*: Bump jpeg-turbo users treewide

New major version 3.0.0

*: Bump PORTREVISIONs for math/mpc update to 1.3.1

Remove WWW entries moved into port Makefiles

Commit b7f05445c00f has added WWW entries to port Makefiles based on
WWW: lines in pkg-descr files.

This commit removes the WWW: lines of moved-over URLs from these
pkg-descr files.

Approved by:		portmgr (tcberner)

Add WWW entries to port Makefiles

It has been common practice to have one or more URLs at the end of the
ports' pkg-descr files, one per line and prefixed with "WWW:". These
URLs should point at a project website or other relevant resources.

Access to these URLs required processing of the pkg-descr files, and
they have often become stale over time. If more than one such URL was
present in a pkg-descr file, only the first one was tarnsfered into
the port INDEX, but for many ports only the last line did contain the
port specific URL to further information.

There have been several proposals to make a project URL available as
a macro in the ports' Makefiles, over time.

graphics: remove 'Created by' lines

A big Thank You to the original contributors of these ports:

  *  "Waitman Gobble" <[email protected]>
  *  Aaron Dalton <[email protected]>
  *  Abel Chow <[email protected]>
  *  Adam Weinberger <[email protected]>
  *  Ade Lovett <[email protected]>
  *  Ade Lovett <[email protected]>
  *  Akinori MUSHA aka knu <[email protected]>
  *  Aldis Berjoza <[email protected]>
  *  Alex Hayward <[email protected]>
  *  Alex Ivasyuv <[email protected]>
  *  Alex Samorukov <[email protected]>

science/netcdf: Update to 4.8.1

- Update MASTER_SITES
- Bump PORTREVISION of dependent ports for shlib change

Changes:	https://github.com/Unidata/netcdf-c/releases

Remove # $FreeBSD$ from Makefiles.

Bump PORTREVISION for science/netcdf shlib change

- update libgd to 2.3.0
- new option RAQM
- resurrect deprecated gdlib-config
- bump dependend ports

Update science/netcdf to 4.6.3

- Bump PORTREVISION of dependent ports for shlib change

Changes:	https://github.com/Unidata/netcdf-c/releases
		https://github.com/Unidata/netcdf-c/blob/master/RELEASE_NOTES.md

Update to 4.5.0

- Pet portlint: reorder LICENSE knobs

Changes:	https://github.com/Unidata/netcdf-c/releases

- update libgd to 2.2.2
- new MASTER_SITES
- add security patch
PR:		210913
Submitted by:	Piotr Kubaj
MFH:		2016Q3
Security: CVE-2015-8874
Security: CVE-2016-3074
Security: http://www.openwall.com/lists/oss-security/2016/07/12/4

Remove ${PORTSDIR}/ from dependencies, categories d, e, f, and g.

With hat:	portmgr
Sponsored by:	Absolight

graphics/grads: document ncurses requirement (USES+=ncurses)

approved by:	infrastructure blanket

Convert to USES=jpeg

Remove $FreeBSD$ from patches files in categories a-j.

With hat:	portmgr
Sponsored by:	Absolight

. Add additional MASTER_SITE.
. Fix checksum and size for example.tar.gz dist file.

PR:		199284
Submitted by:	Rainer Hurling

Mark a few ports in graphics category BROKEN (unfetchable)

Bump portrevision after png update

Change libpng15.so to libpng.so in LIB_DEPENDS to prepare the upgrade

. Make NETCDF the default rather than HDF, and hence unbreak.
. Mark BROKEN only if the HDF option is chosen.
. Remove NOPORTDATA conditional (since this makes no sense).

Mark BROKEN: Fails to package

===>  Building package for grads-1.9b4_9
pkg-static:
lstat(/wrkdirs/usr/ports/graphics/grads/work/stage/usr/local/bin/gradshdf): No
such file or directory
*** [do-package] Error code 1

Reported by:	pkg-fallout

. Fix LIB_DEPENDS format.
. Make STAGE compliant.

. Fix the build with clang.

- Update to 4.3.2 (from science/netcdf4)
- Bump PORTREVISION for science/netcdf shlib change and
  dependency change from science/netcdf4 to science/netcdf [1]

Changes:	http://www.unidata.ucar.edu/software/netcdf/docs/release_notes.html
Approved by:	portmgr (bapt) [1]

Update the default version of GCC used in the Ports Collection from
GCC 4.6.4 to GCC 4.7.3.  This entails updating the lang/gcc port as
well as changing the default in Mk/bsd.default-versions.mk.

Part II, Bump PORTREVISIONs.

PR:		182136
Supported by:	Christoph Moench-Tegeder <[email protected]> (fixing many ports)
Tested by:	bdrewery (two -exp runs)

Update to libmpc version 1.0.1 which brings the following fixes:

 - Switched to automake 1.11.6, see CVE-2012-3386.
 - #14669: Fixed extraction of CC from gmp.h.
 - Fixed case of intermediate zero real or imaginary part in mpc_fma,
   found by hydra with GMP_CHECK_RANDOMIZE=1346362345.

This is on top of the following changes from version 1.0

 - Licence change towards LGPLv3+ for the code and GFDLv1.3+ (with no
   invariant sections) for the documentation.
 - 100% of all lines are covered by tests
 - Renamed functions
   . mpc_mul_2exp to mpc_mul_2ui
   . mpc_div_2exp to mpc_div_2ui

Add NO_STAGE all over the place in preparation for the staging support (cat:
graphics)

- update libdg to 2.1.0

Convert to new options framework

- update png to 1.5.10

-remove MD5

- Bump PORTREVISION for science/netcdf4 shlib change

. Change to NetCDF 4

Submitted by:   Rainer Hurling <[email protected]>

- DISTNAME= ${PORTNAME}-${PORTVERSION} is the default and not needed.

PR:             ports/153292
Submitted by:   myself (pgollucci)
Tested by:      -exp run by pav
Approved by:    portmgr (pav)

. Fix the NetCDF shared library version in its dependency.

Submitted by:   Paul <[email protected]>

- update to 1.4.1
Reviewed by:    exp8 run on pointyhat
Supported by:   miwi

- update to jpeg-8

. The other changes needed to support udunits2.

Pointy hat to:  glewis

. Chase udunits upgrade.

Submitted by:   wen@

- update to jpeg7
Tested by:      pav on pointyhat

. Update to 1.9b4.

. Respect NOPORTDATA and NOPORTEXAMPLES (already respected NOPORTDOCS).
. Simplify the packing list by using PORTDATA, PORTDOCS and PORTEXAMPLES.
. Simplify post-install by using COPYTREE_SHARE.

. Fix the GrADS build to work with HDF again.

Submitted by:   pav@ (mostly)

- libmfhdf is now at so.3 in science/hdf port

Reported by:    pointyhat

- Remove unneeded dependency from gtk12/gtk20 [1]
- Remove USE_XLIB/USE_X_PREFIX/USE_XPM in favor of USE_XORG
- Remove X11BASE support in favor of LOCALBASE or PREFIX
- Use USE_LDCONFIG instead of INSTALLS_SHLIB
- Remove unneeded USE_GCC 3.4+

Thanks to all Helpers:
        Dmitry Marakasov, Chess Griffin, beech@, dinoex, rafan, gahr,
        ehaupt, nox, itetcu, flz, pav

PR:             116263
Tested on:      pointyhat
Approved by:    portmgr (pav)

- Remove USE_XLIB/USE_X_PREFIX/USE_XPM in favor of USE_XORG
- Bump PORTREVISION

Approved by:    portmgr (xorg cleanup)

- Welcome X.org 7.2 \o/.
- Set X11BASE to ${LOCALBASE} for recent ${OSVERSION}.
- Bump PORTREVISION for ports intalling files in ${X11BASE}.

- Respect X11BASE by USE_XLIB + GNU_CONFIGURE

Approved by:    portmgr (linimon)

Remove USE_REINPLACE for categories starting with a G

Repocopy math/netcdf to science/netcdf, along with cdf, hdf and hdf5.

PR:             92497
Submitted by:   /me
Repocopied by:  marcus

. Add SHA256.

Fix bug in continuation line.

Fix INDEX: x11-toolkits/libsx -> x11/libsx in BUILD_DEPENDS

Submitted by:   cperciva

. Add a port of GrADS:

The Grid Analysis and Display System (GrADS) is an interactive
desktop tool that is used for easy access, manipulation, and
visualization of earth science data. The format of the data may be
either binary, GRIB, NetCDF, or HDF-SDS (Scientific Data Sets).
GrADS has been implemented worldwide on a variety of commonly used
operating systems and is freely distributed over the Internet.