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Bioc2024
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News:
BioC2024 in-person registration closes soon (July 10)
BioC2024
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9 weeks ago
Maria Doyle
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BioC2024 Bioconductor Carpentries RNA-Seq Workshop July 22-23
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3 months ago
Maria Doyle
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BioC2024 deadlines approaching
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4 months ago
Maria Doyle
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Deadline Extended - BioC2024 Abstracts and Sticker Contest - April 1st!
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5 months ago
Maria Doyle
▴ 90
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Bioc2024
6 months ago
shepherl
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BioC2024 abstract submission is open!
BioC2024
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Bioconductor
written 6 months ago by
Maria Doyle
▴ 90
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BioC2024 registration is now open!
BioC2024
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6 months ago
Maria Doyle
▴ 90
7 results • Page
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Answer: KEGGgraph result difference
by
alex.pico
▴ 20
I'm not surprised that this fails. Not all GraphNELs nor igraphs are the same, so these chains of conversions are fraught with peril. Assu…
Answer: In the sesame package, what does the estimate output mean from testEnrichment()
by
James W. MacDonald
67k
It's right there in the output (`Log2(OR)`). It's doing a Fisher's exact test, which returns an odds ratio, and the output is the log odds …
Comment: WGCNA Choosing soft threshold power below R^2 0.8
by
Lluís Revilla Sancho
▴ 730
This is not a bioconductor pacakge, but have you considered that something might be off with your data? Do you have enough samples of each …
Comment: WARNING: No Bioconductor dependencies detected.
by
katja.danielzik
• 0
Hi Laurent, thank you for your answer! Yes, I will use the Summarized Experiment class in package. Best, Katja
Comment: Rsubread alignment crashes at 35%, valgrind indicates invalid writes
by
venusian.martin
• 0
EDIT: I managed to find the documentation where `sublong` is noted :) When I use sublong with the same inputs as in my OP, I get this err…
Votes
C: Usability of ERCC spike-ins in standard RNAseq experiments
A: Usability of ERCC spike-ins in standard RNAseq experiments
A: Using the ERCC spike as a normalization factor for a custom algorithm
Answer: Cannabis and KEGGgraph
Save the Date for EuroBioC2025 in Barcelona!
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