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News:
Win 1 of 50 free virtual registrations to BioC Asia 2022 (Dec 1-2, 2022)
Asia
BioCAsia
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BioC
written 22 months ago by
Peter Hickey
▴ 740
0
votes
2
replies
644
views
can't update bioconductor 3.18
BioCor
bioc
BiocVersion
10 months ago
feifan
• 0
0
votes
1
reply
947
views
JAVA_HOME cannot be determined on Windows on Bioconductor platform report
bioc
Bioconductor
updated 2.9 years ago by
Hervé Pagès
16k • written 2.9 years ago by
cannin
▴ 20
0
votes
1
reply
2.1k
views
Multiple R versions
R
bioc
updated 5.5 years ago by
Martin Morgan
25k • written 5.5 years ago by
pawan12394
• 0
0
votes
5
replies
1.9k
views
BioC happening in 2018?
BioC
2018
Course
7.1 years ago
s.munster
▴ 40
0
votes
1
reply
1.6k
views
Errors installing RforProteomics
Bioc
package installation
rforproteomics
updated 8.5 years ago by
Laurent Gatto
1.6k • written 8.5 years ago by
sarahgrogan
• 0
6 results • Page
1 of 1
Recent ...
Replies
Answer: KEGGgraph result difference
by
alex.pico
▴ 20
I'm not surprised that this fails. Not all GraphNELs nor igraphs are the same, so these chains of conversions are fraught with peril. Assu…
Answer: In the sesame package, what does the estimate output mean from testEnrichment()
by
James W. MacDonald
67k
It's right there in the output (`Log2(OR)`). It's doing a Fisher's exact test, which returns an odds ratio, and the output is the log odds …
Comment: WGCNA Choosing soft threshold power below R^2 0.8
by
Lluís Revilla Sancho
▴ 730
This is not a bioconductor pacakge, but have you considered that something might be off with your data? Do you have enough samples of each …
Comment: WARNING: No Bioconductor dependencies detected.
by
katja.danielzik
• 0
Hi Laurent, thank you for your answer! Yes, I will use the Summarized Experiment class in package. Best, Katja
Comment: Rsubread alignment crashes at 35%, valgrind indicates invalid writes
by
venusian.martin
• 0
EDIT: I managed to find the documentation where `sublong` is noted :) When I use sublong with the same inputs as in my OP, I get this err…
Votes
C: Usability of ERCC spike-ins in standard RNAseq experiments
A: Usability of ERCC spike-ins in standard RNAseq experiments
A: Using the ERCC spike as a normalization factor for a custom algorithm
Answer: Cannabis and KEGGgraph
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