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February 2018 Morning Status Meetings
Updating only main.cpp with the addition of the Fe network. SB 20180201
Updating Monitor0D.cpp that was removed in last commit. SB 20180201
Updating only the xolotlSolver folder with the addition of the Fe network. SB 20180201
Updating only the xolotlFactory folder with the addition of the Fe network. SB 20180201
Updating IDiffusionHandler.h that was removed in last commit. SB 20180201
Updating only the xolotlCore folder with the addition of the Fe network. SB 20180201
Updating DummyTrapMutationHandlerTester that was blank in last commit. SB 20180201
Updating DummyTrapMutationHandlerTester that was removed in last commit. SB 20180201
Removing DummyTrapMutationHandlerTester. SB 20180201
Updating only the tests folder with the addition of the Fe network. SB 20180201
Removing a file that apparently caused corruption. SB 20180201
Creating a new Fe branch because the iron branch is corrupted. SB 20180201
Adding Fe source files to monitor1D. SB 20180201
Adding the Fe reaction network from Aaron's test problem with analytical methods for the grouping. Adding Phil Roth optimizations in the PSI network. Updating the tests. Tests for Fe are still missing, and preprocessor needs to be updated. SB 20180201
January 2018 Morning Status Meetings
January 2018 Morning Status Meetings
Parameter File
January 2018 Morning Status Meetings
January 2018 Morning Status Meetings
January 2018 Morning Status Meetings
January 2018 Morning Status Meetings
Adding FeFitFluxHandler and associated test. Updating the other flux handlers. SB 20180122
Creating a new branch to implement an iron material case with optimizations from the bubble test branches. SB 20180122
January 2018 Morning Status Meetings
Updating the find cmake support from Jed Brown and fix from the collapse branch. SB 20180118
January 2018 Morning Status Meetings
Reverting to without Pade approximation and fixing the computation of moments. SB 20180111
New branch on the bubble test case with grouping and Pade implementation. SB 20180110
New branch on the bubble test case with grouping and Pade implementation. SB 20180110
January 2018 Morning Status Meetings
January 2018 Morning Status Meetings
January 2018 Morning Status Meetings
January 2018 Morning Status Meetings
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January 2018 Morning Status Meetings
Parameter File
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Parameter File
Adding 2 parameter files to run a standard NE and PSI2 case with Xolotl current revision. SB 20171212
Changing the xenon migration parameters to reproduce test 3 of the test cases. SB 20171212
December 2017 Morning Status Meetings
Reverting the bursting in 1D to a monitor because only one post step method can be set with PETSc at a time. SB 20171211
The building of the preprocessor is optional and happens only if Java is found. Fixed the Petsc method that was deprecated. SB 20171211
December 2017 Morning Status Meetings
December 2017 Morning Status Meetings
Adding a PETSc option to check when the dt goes under a threshold and stop the solver. Writes the reason for stopping in a file. SB 20171205
Adding the depth of the fit as an argument in the tridyn flux handler when reading the input file. SB 20171205
December 2017 Morning Status Meetings
Fixing the printing of the surface and writing the flux vectors at each initialization for TRIDYN flux. SB 20171204
December 2017 Morning Status Meetings
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December 2017 Morning Status Meetings
First implementation of Pade approximation on top of the moment grouping scheme but for now it is commented. SB 20171130
November 2017 Morning Status Meetings
November 2017 Morning Status Meetings
November 2017 Morning Status Meetings
Fixing the computation of the moments when the grouping grid is updated. SB 20171127
November 2017 Morning Status Meetings
November 2017 Morning Status Meetings
First implementation of a dynamic solver that extends and changes the grouping scheme at each loop. Not optimized at all. SB 20171120
November 2017 Morning Status Meetings
November 2017 Morning Status Meetings
Modified the grouping so that the biggest cluster is grouped on its own to get similar results as no grouping. Updated the corresponding tests. SB 20171115
November 2017 Morning Status Meetings
November 2017 Morning Status Meetings
November 2017 Morning Status Meetings
Changed the boundary conditions for free surface that were causing PETSc to behave strangely after 20s of simulation. Updated the new boundary conditions in 2D and 3D. SB 20171101
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November 2017 Morning Status Meetings
October 2017 Morning Status Meetings
October 2017 Morning Status Meetings
October 2017 Morning Status Meetings
October 2017 Morning Status Meetings
October 2017 Morning Status Meetings
The loop over the bounds of the groups for super clusters has been replaced by analytical functions. SB 20171018
Creating a new bubble test branch for the implementation of analytical functions for the group coefficients. SB 20171018
October 2017 Morning Status Meetings
October 2017 Morning Status Meetings
October 2017 Morning Status Meetings
October 2017 Morning Status Meetings
October 2017 Morning Status Meetings
Fixed the loop on the non super clusters to compute the partials for the reactions. SB 20171010
October 2017 Morning Status Meetings
October 2017 Morning Status Meetings
Preprocessor
Adding the option to switch between mirror and free surface boundary conditions on the left and right sides of the grid (surface, bulk). Increased the xGrid size to account for diffusion at either end and updated the tests accordingly. SB 20171006
October 2017 Morning Status Meetings
October 2017 Morning Status Meetings
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October 2017 Morning Status Meetings
Updating the network loaders so that Xolotl can ran without the reactions set. SB 20170929
September 2017 Morning Status Meetings
Fixing the temperature handlers and the solvers so that Xolotl can run with reaction only. SB 20170928
Updating the hydrogen branch to a simplified setup without dissociation. SB 20170928
September 2017 Morning Status Meetings
September 2017 Morning Status Meetings