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From: Christopher B. <cbr...@gm...> - 2010-06-12 22:57:35
|
On an iMac running 10.6.3, python 2.6.4 I have installed numpy and then matplotlib using 'pip'.
The message in both cases was that the install was successful.
'import matplotlib' does not cause error messages.
'from pylab import randn, hist' gets a traceback with the message "ImportError: No module named ma"
How do I get matplotlib to work?
Thank you for any help.
Christopher
------
>>> from pylab import randn, hist
/Library/Frameworks/Python.framework/Versions/2.6/lib/python2.6/site-packages/matplotlib/__init__.py:62: DeprecationWarning: the md5 module is deprecated; use hashlib instead
import md5, os, re, shutil, sys, warnings
/Library/Frameworks/Python.framework/Versions/2.6/lib/python2.6/site-packages/pytz/tzinfo.py:5: DeprecationWarning: the sets module is deprecated
from sets import Set
Traceback (most recent call last):
File "<stdin>", line 1, in <module>
File "/Library/Frameworks/Python.framework/Versions/2.6/lib/python2.6/site-packages/pylab.py", line 1, in <module>
from matplotlib.pylab import *
File "/Library/Frameworks/Python.framework/Versions/2.6/lib/python2.6/site-packages/matplotlib/pylab.py", line 206, in <module>
from matplotlib.numerix import npyma as ma
File "/Library/Frameworks/Python.framework/Versions/2.6/lib/python2.6/site-packages/matplotlib/numerix/__init__.py", line 166, in <module>
__import__('ma', g, l)
File "/Library/Frameworks/Python.framework/Versions/2.6/lib/python2.6/site-packages/matplotlib/numerix/ma/__init__.py", line 16, in <module>
from numpy.core.ma import *
ImportError: No module named ma
------
|
|
From: Miguel de V. B. <mig...@gm...> - 2010-06-12 20:27:10
|
Hi,
I would like to set the limits of the x axis and get the y scale
adjusted to the new range. I have tried something like
plot.axis('tight', xmin=0, xmax=1), but this shows all the data as
indicated in the documentation. Is there any way to limit the x axis
and set the y axis to tight?
Thanks,
Miguel
|
|
From: Eric F. <ef...@ha...> - 2010-06-12 01:49:28
|
On 06/11/2010 03:24 PM, Dr. David Kirkby wrote: > On 06/11/10 10:28 PM, Eric Firing wrote: >> On 06/11/2010 10:54 AM, Dr. David Kirkby wrote: >>> The latest stable (0.99.3) matplotlib builds ok on Solaris 10 03/05 on SPARC. >>> >>> However, your latest trunc release has some useful fixes, so it was downloaded >>> by a fellow Sage devloper. However, when I try to build this version on a Sun >>> Blade 1000 running Solaris 10 03/05, it presents a problem: >>> >>> /usr/include/stdlib.h:144: error: declaration of C function 'void swab(const >>> char*, char*, ssize_t)' conflicts with >>> /usr/include/unistd.h:480: error: previous declaration 'void swab(const void*, >>> void*, ssize_t)' here >>> error: command 'gcc' failed with exit status 1 >>> Error building matplotlib package. >>> >>> >>> There are two declarations of 'swab' in the Solaris header files, and what one >>> you get depends on the compilation mode. The reasons are explained in the >>> Solaris header files. >>> >>> The issue is traced at >>> >>> http://trac.sagemath.org/sage_trac/ticket/9202 >>> >>> where you will see the full error message and attachments of the header files. >>> >>> For this, gcc 4.4.4 was used. >> >> Can you get it to work by adding "-D_XOPEN_SOURCE" to your CFLAGS >> environment variable? >> >> Eric > > I did reply, but I think off-list by mistake. So I'll reply to the list. > > I think this actually causes the build to break earlier. > > Do you have access to Sun SPARC hardware? If not, I can almost certainly arrange > access to a Sun T5240 (16 core) at the University of Washington for a serious > matplotlib developer. Dave, Thanks, but much as I would like to see this problem solved, I don't really want to get sucked into it. I haven't messed with Suns for many years, and I am not eager to resume. Did you compile the previous version of matplotlib that you used on your machine, or did someone else there do it? Have you looked at the Cookbook entry? http://www.scipy.org/Cookbook/Matplotlib/CompilingMatPlotLibOnSolaris10 Eric > > Dave > > > ld/lib.solaris-2.10-sun4u-2.6/matplotlib/tests/baseline_images/test_image > copying lib/matplotlib/tests/baseline_images/test_image/image_interps.svg -> bui > ld/lib.solaris-2.10-sun4u-2.6/matplotlib/tests/baseline_images/test_image > creating build/lib.solaris-2.10-sun4u-2.6/matplotlib/tests/baseline_images/test_ > mathtext > copying lib/matplotlib/tests/baseline_images/test_mathtext/mathtext.pdf -> build > /lib.solaris-2.10-sun4u-2.6/matplotlib/tests/baseline_images/test_mathtext > copying lib/matplotlib/tests/baseline_images/test_mathtext/mathtext.png -> build > /lib.solaris-2.10-sun4u-2.6/matplotlib/tests/baseline_images/test_mathtext > copying lib/matplotlib/tests/baseline_images/test_mathtext/mathtext.svg -> build > /lib.solaris-2.10-sun4u-2.6/matplotlib/tests/baseline_images/test_mathtext > copying lib/matplotlib/tests/baseline_images/test_mathtext/mathtext_stix.pdf -> > build/lib.solaris-2.10-sun4u-2.6/matplotlib/tests/baseline_images/test_mathtext > copying lib/matplotlib/tests/baseline_images/test_mathtext/mathtext_stix.png -> > build/lib.solaris-2.10-sun4u-2.6/matplotlib/tests/baseline_images/test_mathtext > copying lib/matplotlib/tests/baseline_images/test_mathtext/mathtext_stix.svg -> > build/lib.solaris-2.10-sun4u-2.6/matplotlib/tests/baseline_images/test_mathtext > copying lib/matplotlib/tests/baseline_images/test_mathtext/mathtext_stixsans.pdf > -> build/lib.solaris-2.10-sun4u-2.6/matplotlib/tests/baseline_images/test_matht > ext > copying lib/matplotlib/tests/baseline_images/test_mathtext/mathtext_stixsans.png > -> build/lib.solaris-2.10-sun4u-2.6/matplotlib/tests/baseline_images/test_matht > ext > copying lib/matplotlib/tests/baseline_images/test_mathtext/mathtext_stixsans.svg > -> build/lib.solaris-2.10-sun4u-2.6/matplotlib/tests/baseline_images/test_matht > ext > creating build/lib.solaris-2.10-sun4u-2.6/matplotlib/tests/baseline_images/test_ > simplification > copying lib/matplotlib/tests/baseline_images/test_simplification/clipping.pdf -> > build/lib.solaris-2.10-sun4u-2.6/matplotlib/tests/baseline_images/test_simplifi > cation > copying lib/matplotlib/tests/baseline_images/test_simplification/clipping.png -> > build/lib.solaris-2.10-sun4u-2.6/matplotlib/tests/baseline_images/test_simplifi > cation > copying lib/matplotlib/tests/baseline_images/test_simplification/clipping.svg -> > build/lib.solaris-2.10-sun4u-2.6/matplotlib/tests/baseline_images/test_simplifi > cation > copying lib/matplotlib/tests/baseline_images/test_simplification/clipping_diamon > d.pdf -> build/lib.solaris-2.10-sun4u-2.6/matplotlib/tests/baseline_images/test_ > simplification > copying lib/matplotlib/tests/baseline_images/test_simplification/clipping_diamon > d.png -> build/lib.solaris-2.10-sun4u-2.6/matplotlib/tests/baseline_images/test_ > simplification > copying lib/matplotlib/tests/baseline_images/test_simplification/clipping_diamon > d.svg -> build/lib.solaris-2.10-sun4u-2.6/matplotlib/tests/baseline_images/test_ > simplification > copying lib/matplotlib/tests/baseline_images/test_simplification/fft_peaks.pdf - > > build/lib.solaris-2.10-sun4u-2.6/matplotlib/tests/baseline_images/test_simplif > ication > copying lib/matplotlib/tests/baseline_images/test_simplification/fft_peaks.png - > > build/lib.solaris-2.10-sun4u-2.6/matplotlib/tests/baseline_images/test_simplif > ication > copying lib/matplotlib/tests/baseline_images/test_simplification/fft_peaks.svg - > > build/lib.solaris-2.10-sun4u-2.6/matplotlib/tests/baseline_images/test_simplif > ication > copying lib/matplotlib/tests/baseline_images/test_simplification/hatch_simplify. > pdf -> build/lib.solaris-2.10-sun4u-2.6/matplotlib/tests/baseline_images/test_si > mplification > copying lib/matplotlib/tests/baseline_images/test_simplification/hatch_simplify. > png -> build/lib.solaris-2.10-sun4u-2.6/matplotlib/tests/baseline_images/test_si > mplification > copying lib/matplotlib/tests/baseline_images/test_simplification/hatch_simplify. > svg -> build/lib.solaris-2.10-sun4u-2.6/matplotlib/tests/baseline_images/test_si > mplification > copying lib/matplotlib/tests/baseline_images/test_simplification/overflow.pdf -> > build/lib.solaris-2.10-sun4u-2.6/matplotlib/tests/baseline_images/test_simplifi > cation > copying lib/matplotlib/tests/baseline_images/test_simplification/overflow.png -> > build/lib.solaris-2.10-sun4u-2.6/matplotlib/tests/baseline_images/test_simplifi > cation > copying lib/matplotlib/tests/baseline_images/test_simplification/overflow.svg -> > build/lib.solaris-2.10-sun4u-2.6/matplotlib/tests/baseline_images/test_simplifi > cation > copying lib/matplotlib/tests/baseline_images/test_simplification/simplify_curve. > pdf -> build/lib.solaris-2.10-sun4u-2.6/matplotlib/tests/baseline_images/test_si > mplification > copying lib/matplotlib/tests/baseline_images/test_simplification/simplify_curve. > png -> build/lib.solaris-2.10-sun4u-2.6/matplotlib/tests/baseline_images/test_si > mplification > copying lib/matplotlib/tests/baseline_images/test_simplification/simplify_curve. > svg -> build/lib.solaris-2.10-sun4u-2.6/matplotlib/tests/baseline_images/test_si > mplification > creating build/lib.solaris-2.10-sun4u-2.6/matplotlib/tests/baseline_images/test_ > spines > copying lib/matplotlib/tests/baseline_images/test_spines/spines_axes_positions.p > df -> build/lib.solaris-2.10-sun4u-2.6/matplotlib/tests/baseline_images/test_spi > nes > copying lib/matplotlib/tests/baseline_images/test_spines/spines_axes_positions.p > ng -> build/lib.solaris-2.10-sun4u-2.6/matplotlib/tests/baseline_images/test_spi > nes > copying lib/matplotlib/tests/baseline_images/test_spines/spines_axes_positions.s > vg -> build/lib.solaris-2.10-sun4u-2.6/matplotlib/tests/baseline_images/test_spi > nes > creating build/lib.solaris-2.10-sun4u-2.6/matplotlib/tests/baseline_images/test_ > text > copying lib/matplotlib/tests/baseline_images/test_text/font_styles.pdf -> build/ > lib.solaris-2.10-sun4u-2.6/matplotlib/tests/baseline_images/test_text > copying lib/matplotlib/tests/baseline_images/test_text/font_styles.png -> build/ > lib.solaris-2.10-sun4u-2.6/matplotlib/tests/baseline_images/test_text > copying lib/matplotlib/tests/baseline_images/test_text/font_styles.svg -> build/ > lib.solaris-2.10-sun4u-2.6/matplotlib/tests/baseline_images/test_text > copying lib/matplotlib/tests/baseline_images/test_text/multiline.pdf -> build/li > b.solaris-2.10-sun4u-2.6/matplotlib/tests/baseline_images/test_text > copying lib/matplotlib/tests/baseline_images/test_text/multiline.png -> build/li > b.solaris-2.10-sun4u-2.6/matplotlib/tests/baseline_images/test_text > copying lib/matplotlib/tests/baseline_images/test_text/multiline.svg -> build/li > b.solaris-2.10-sun4u-2.6/matplotlib/tests/baseline_images/test_text > copying lib/dateutil/zoneinfo/zoneinfo-2010g.tar.gz -> build/lib.solaris-2.10-su > n4u-2.6/dateutil/zoneinfo > running build_ext > building 'matplotlib.ft2font' extension > creating build/temp.solaris-2.10-sun4u-2.6 > creating build/temp.solaris-2.10-sun4u-2.6/src > creating build/temp.solaris-2.10-sun4u-2.6/CXX > gcc -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_XOPEN_SOURCE -fPIC -DPY > _ARRAY_UNIQUE_SYMBOL=MPL_ARRAY_API -DPYCXX_ISO_CPP_LIB=1 -I/export/home/drkirkby > /32/sage-4.4.3/local/lib/python2.6/site-packages/numpy/core/include -I/export/ho > me/drkirkby/32/sage-4.4.3/local/include/freetype2 -I/export/home/drkirkby/32/sag > e-4.4.3/local/include -I/export/home/drkirkby/32/sage-4.4.3/local/include -I. -I > /export/home/drkirkby/32/sage-4.4.3/local/include/python2.6 -c src/ft2font.cpp - > o build/temp.solaris-2.10-sun4u-2.6/src/ft2font.o > cc1plus: warning: command line option "-Wstrict-prototypes" is valid for Ada/C/O > bjC but not for C++ > <command-line>: warning: "_XOPEN_SOURCE" redefined > <built-in>: warning: this is the location of the previous definition > In file included from /export/home/drkirkby/32/sage-4.4.3/local/include/python2. > 6/Python.h:8, > from ./CXX/WrapPython.h:58, > from ./CXX/Extensions.hxx:37, > from src/ft2font.h:4, > from src/ft2font.cpp:1: > /export/home/drkirkby/32/sage-4.4.3/local/include/python2.6/pyconfig.h:1013:1: w > arning: "_FILE_OFFSET_BITS" redefined > In file included from /usr/include/sys/time.h:24, > from ./CXX/WrapPython.h:43, > from ./CXX/Extensions.hxx:37, > from src/ft2font.h:4, > from src/ft2font.cpp:1: > /usr/local/gcc-4.4.3/lib/gcc/sparc-sun-solaris2.10/4.4.3/include-fixed/sys/featu > re_tests.h:197:1: warning: this is the location of the previous definition > src/ft2font.cpp: In member function 'Py::Object FT2Font::get_sfnt_table(const Py > ::Tuple&)': > src/ft2font.cpp:1569: warning: dereferencing type-punned pointer will break stri > ct-aliasing rules > src/ft2font.cpp:1572: warning: dereferencing type-punned pointer will break stri > ct-aliasing rules > src/ft2font.cpp:1597: warning: dereferencing type-punned pointer will break stri > ct-aliasing rules > src/ft2font.cpp:1661: warning: dereferencing type-punned pointer will break stri > ct-aliasing rules > src/ft2font.cpp:1684: warning: dereferencing type-punned pointer will break stri > ct-aliasing rules > src/ft2font.cpp:1705: warning: dereferencing type-punned pointer will break stri > ct-aliasing rules > src/ft2font.cpp:1708: warning: dereferencing type-punned pointer will break stri > ct-aliasing rules > src/ft2font.cpp:1725: warning: dereferencing type-punned pointer will break stri > ct-aliasing rules > gcc -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_XOPEN_SOURCE -fPIC -DPY > _ARRAY_UNIQUE_SYMBOL=MPL_ARRAY_API -DPYCXX_ISO_CPP_LIB=1 -I/export/home/drkirkby > /32/sage-4.4.3/local/lib/python2.6/site-packages/numpy/core/include -I/export/ho > me/drkirkby/32/sage-4.4.3/local/include/freetype2 -I/export/home/drkirkby/32/sag > e-4.4.3/local/include -I/export/home/drkirkby/32/sage-4.4.3/local/include -I. -I > /export/home/drkirkby/32/sage-4.4.3/local/include/python2.6 -c src/mplutils.cpp > -o build/temp.solaris-2.10-sun4u-2.6/src/mplutils.o > cc1plus: warning: command line option "-Wstrict-prototypes" is valid for Ada/C/O > bjC but not for C++ > <command-line>: warning: "_XOPEN_SOURCE" redefined > <built-in>: warning: this is the location of the previous definition > gcc -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_XOPEN_SOURCE -fPIC -DPY > _ARRAY_UNIQUE_SYMBOL=MPL_ARRAY_API -DPYCXX_ISO_CPP_LIB=1 -I/export/home/drkirkby > /32/sage-4.4.3/local/lib/python2.6/site-packages/numpy/core/include -I/export/ho > me/drkirkby/32/sage-4.4.3/local/include/freetype2 -I/export/home/drkirkby/32/sag > e-4.4.3/local/include -I/export/home/drkirkby/32/sage-4.4.3/local/include -I. -I > /export/home/drkirkby/32/sage-4.4.3/local/include/python2.6 -c CXX/cxx_extension > s.cxx -o build/temp.solaris-2.10-sun4u-2.6/CXX/cxx_extensions.o > cc1plus: warning: command line option "-Wstrict-prototypes" is valid for Ada/C/O > bjC but not for C++ > <command-line>: warning: "_XOPEN_SOURCE" redefined > <built-in>: warning: this is the location of the previous definition > In file included from /export/home/drkirkby/32/sage-4.4.3/local/include/python2. > 6/Python.h:8, > from ./CXX/WrapPython.h:58, > from CXX/cxx_extensions.cxx:37: > /export/home/drkirkby/32/sage-4.4.3/local/include/python2.6/pyconfig.h:1013:1: w > arning: "_FILE_OFFSET_BITS" redefined > In file included from /usr/include/sys/time.h:24, > from ./CXX/WrapPython.h:43, > from CXX/cxx_extensions.cxx:37: > /usr/local/gcc-4.4.3/lib/gcc/sparc-sun-solaris2.10/4.4.3/include-fixed/sys/featu > re_tests.h:197:1: warning: this is the location of the previous definition > gcc -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_XOPEN_SOURCE -fPIC -DPY > _ARRAY_UNIQUE_SYMBOL=MPL_ARRAY_API -DPYCXX_ISO_CPP_LIB=1 -I/export/home/drkirkby > /32/sage-4.4.3/local/lib/python2.6/site-packages/numpy/core/include -I/export/ho > me/drkirkby/32/sage-4.4.3/local/include/freetype2 -I/export/home/drkirkby/32/sag > e-4.4.3/local/include -I/export/home/drkirkby/32/sage-4.4.3/local/include -I. -I > /export/home/drkirkby/32/sage-4.4.3/local/include/python2.6 -c CXX/cxxsupport.cx > x -o build/temp.solaris-2.10-sun4u-2.6/CXX/cxxsupport.o > cc1plus: warning: command line option "-Wstrict-prototypes" is valid for Ada/C/O > bjC but not for C++ > <command-line>: warning: "_XOPEN_SOURCE" redefined > <built-in>: warning: this is the location of the previous definition > In file included from /export/home/drkirkby/32/sage-4.4.3/local/include/python2. > 6/Python.h:8, > from ./CXX/WrapPython.h:58, > from CXX/cxxsupport.cxx:37: > /export/home/drkirkby/32/sage-4.4.3/local/include/python2.6/pyconfig.h:1013:1: w > arning: "_FILE_OFFSET_BITS" redefined > In file included from /usr/include/sys/time.h:24, > from ./CXX/WrapPython.h:43, > from CXX/cxxsupport.cxx:37: > /usr/local/gcc-4.4.3/lib/gcc/sparc-sun-solaris2.10/4.4.3/include-fixed/sys/featu > re_tests.h:197:1: warning: this is the location of the previous definition > gcc -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_XOPEN_SOURCE -fPIC -DPY > _ARRAY_UNIQUE_SYMBOL=MPL_ARRAY_API -DPYCXX_ISO_CPP_LIB=1 -I/export/home/drkirkby > /32/sage-4.4.3/local/lib/python2.6/site-packages/numpy/core/include -I/export/ho > me/drkirkby/32/sage-4.4.3/local/include/freetype2 -I/export/home/drkirkby/32/sag > e-4.4.3/local/include -I/export/home/drkirkby/32/sage-4.4.3/local/include -I. -I > /export/home/drkirkby/32/sage-4.4.3/local/include/python2.6 -c CXX/IndirectPytho > nInterface.cxx -o build/temp.solaris-2.10-sun4u-2.6/CXX/IndirectPythonInterface. > o > cc1plus: warning: command line option "-Wstrict-prototypes" is valid for Ada/C/O > bjC but not for C++ > <command-line>: warning: "_XOPEN_SOURCE" redefined > <built-in>: warning: this is the location of the previous definition > In file included from /export/home/drkirkby/32/sage-4.4.3/local/include/python2. > 6/Python.h:8, > from ./CXX/WrapPython.h:58, > from CXX/IndirectPythonInterface.cxx:37: > /export/home/drkirkby/32/sage-4.4.3/local/include/python2.6/pyconfig.h:1013:1: w > arning: "_FILE_OFFSET_BITS" redefined > In file included from /usr/include/sys/time.h:24, > from ./CXX/WrapPython.h:43, > from CXX/IndirectPythonInterface.cxx:37: > /usr/local/gcc-4.4.3/lib/gcc/sparc-sun-solaris2.10/4.4.3/include-fixed/sys/featu > re_tests.h:197:1: warning: this is the location of the previous definition > gcc -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_XOPEN_SOURCE -fPIC -DPY > _ARRAY_UNIQUE_SYMBOL=MPL_ARRAY_API -DPYCXX_ISO_CPP_LIB=1 -I/export/home/drkirkby > /32/sage-4.4.3/local/lib/python2.6/site-packages/numpy/core/include -I/export/ho > me/drkirkby/32/sage-4.4.3/local/include/freetype2 -I/export/home/drkirkby/32/sag > e-4.4.3/local/include -I/export/home/drkirkby/32/sage-4.4.3/local/include -I. -I > /export/home/drkirkby/32/sage-4.4.3/local/include/python2.6 -c CXX/cxxextensions > .c -o build/temp.solaris-2.10-sun4u-2.6/CXX/cxxextensions.o > In file included from /export/home/drkirkby/32/sage-4.4.3/local/include/python2. > 6/Python.h:8, > from ./CXX/WrapPython.h:58, > from CXX/cxxextensions.c:37: > /export/home/drkirkby/32/sage-4.4.3/local/include/python2.6/pyconfig.h:1013:1: w > arning: "_FILE_OFFSET_BITS" redefined > In file included from /usr/include/sys/time.h:24, > from ./CXX/WrapPython.h:43, > from CXX/cxxextensions.c:37: > /usr/local/gcc-4.4.3/lib/gcc/sparc-sun-solaris2.10/4.4.3/include-fixed/sys/featu > re_tests.h:197:1: warning: this is the location of the previous definition > In file included from /usr/include/sys/wait.h:23, > from /usr/include/stdlib.h:22, > from /export/home/drkirkby/32/sage-4.4.3/local/include/python2. > 6/Python.h:42, > from ./CXX/WrapPython.h:58, > from CXX/cxxextensions.c:37: > /usr/include/sys/resource.h:146: error: field 'ru_utime' has incomplete type > /usr/include/sys/resource.h:147: error: field 'ru_stime' has incomplete type > In file included from /usr/include/sys/termio.h:13, > from /export/home/drkirkby/32/sage-4.4.3/local/include/python2. > 6/pyport.h:472, > from /export/home/drkirkby/32/sage-4.4.3/local/include/python2. > 6/Python.h:58, > from ./CXX/WrapPython.h:58, > from CXX/cxxextensions.c:37: > /usr/include/sys/termios.h:375: error: field 'tv' has incomplete type > error: command 'gcc' failed with exit status 1 > Error building matplotlib package. > > real 0m51.119s > user 0m47.346s > sys 0m3.132s > sage: An error occurred while installing matplotlib-0.99.3-svn8415-with-D_XOPEN_ > SOURCE > Please email sage-devel http://groups.google.com/group/sage-devel > explaining the problem and send the relevant part of > > > > > > > ------------------------------------------------------------------------------ > ThinkGeek and WIRED's GeekDad team up for the Ultimate > GeekDad Father's Day Giveaway. ONE MASSIVE PRIZE to the > lucky parental unit. See the prize list and enter to win: > http://p.sf.net/sfu/thinkgeek-promo > _______________________________________________ > Matplotlib-users mailing list > Mat...@li... > https://lists.sourceforge.net/lists/listinfo/matplotlib-users |
|
From: Dr. D. K. <dav...@on...> - 2010-06-12 01:24:45
|
On 06/11/10 10:28 PM, Eric Firing wrote: > On 06/11/2010 10:54 AM, Dr. David Kirkby wrote: >> The latest stable (0.99.3) matplotlib builds ok on Solaris 10 03/05 on SPARC. >> >> However, your latest trunc release has some useful fixes, so it was downloaded >> by a fellow Sage devloper. However, when I try to build this version on a Sun >> Blade 1000 running Solaris 10 03/05, it presents a problem: >> >> /usr/include/stdlib.h:144: error: declaration of C function 'void swab(const >> char*, char*, ssize_t)' conflicts with >> /usr/include/unistd.h:480: error: previous declaration 'void swab(const void*, >> void*, ssize_t)' here >> error: command 'gcc' failed with exit status 1 >> Error building matplotlib package. >> >> >> There are two declarations of 'swab' in the Solaris header files, and what one >> you get depends on the compilation mode. The reasons are explained in the >> Solaris header files. >> >> The issue is traced at >> >> http://trac.sagemath.org/sage_trac/ticket/9202 >> >> where you will see the full error message and attachments of the header files. >> >> For this, gcc 4.4.4 was used. > > Can you get it to work by adding "-D_XOPEN_SOURCE" to your CFLAGS > environment variable? > > Eric I did reply, but I think off-list by mistake. So I'll reply to the list. I think this actually causes the build to break earlier. Do you have access to Sun SPARC hardware? If not, I can almost certainly arrange access to a Sun T5240 (16 core) at the University of Washington for a serious matplotlib developer. Dave ld/lib.solaris-2.10-sun4u-2.6/matplotlib/tests/baseline_images/test_image copying lib/matplotlib/tests/baseline_images/test_image/image_interps.svg -> bui ld/lib.solaris-2.10-sun4u-2.6/matplotlib/tests/baseline_images/test_image creating build/lib.solaris-2.10-sun4u-2.6/matplotlib/tests/baseline_images/test_ mathtext copying lib/matplotlib/tests/baseline_images/test_mathtext/mathtext.pdf -> build /lib.solaris-2.10-sun4u-2.6/matplotlib/tests/baseline_images/test_mathtext copying lib/matplotlib/tests/baseline_images/test_mathtext/mathtext.png -> build /lib.solaris-2.10-sun4u-2.6/matplotlib/tests/baseline_images/test_mathtext copying lib/matplotlib/tests/baseline_images/test_mathtext/mathtext.svg -> build /lib.solaris-2.10-sun4u-2.6/matplotlib/tests/baseline_images/test_mathtext copying lib/matplotlib/tests/baseline_images/test_mathtext/mathtext_stix.pdf -> build/lib.solaris-2.10-sun4u-2.6/matplotlib/tests/baseline_images/test_mathtext copying lib/matplotlib/tests/baseline_images/test_mathtext/mathtext_stix.png -> build/lib.solaris-2.10-sun4u-2.6/matplotlib/tests/baseline_images/test_mathtext copying lib/matplotlib/tests/baseline_images/test_mathtext/mathtext_stix.svg -> build/lib.solaris-2.10-sun4u-2.6/matplotlib/tests/baseline_images/test_mathtext copying lib/matplotlib/tests/baseline_images/test_mathtext/mathtext_stixsans.pdf -> build/lib.solaris-2.10-sun4u-2.6/matplotlib/tests/baseline_images/test_matht ext copying lib/matplotlib/tests/baseline_images/test_mathtext/mathtext_stixsans.png -> build/lib.solaris-2.10-sun4u-2.6/matplotlib/tests/baseline_images/test_matht ext copying lib/matplotlib/tests/baseline_images/test_mathtext/mathtext_stixsans.svg -> build/lib.solaris-2.10-sun4u-2.6/matplotlib/tests/baseline_images/test_matht ext creating build/lib.solaris-2.10-sun4u-2.6/matplotlib/tests/baseline_images/test_ simplification copying lib/matplotlib/tests/baseline_images/test_simplification/clipping.pdf -> build/lib.solaris-2.10-sun4u-2.6/matplotlib/tests/baseline_images/test_simplifi cation copying lib/matplotlib/tests/baseline_images/test_simplification/clipping.png -> build/lib.solaris-2.10-sun4u-2.6/matplotlib/tests/baseline_images/test_simplifi cation copying lib/matplotlib/tests/baseline_images/test_simplification/clipping.svg -> build/lib.solaris-2.10-sun4u-2.6/matplotlib/tests/baseline_images/test_simplifi cation copying lib/matplotlib/tests/baseline_images/test_simplification/clipping_diamon d.pdf -> build/lib.solaris-2.10-sun4u-2.6/matplotlib/tests/baseline_images/test_ simplification copying lib/matplotlib/tests/baseline_images/test_simplification/clipping_diamon d.png -> build/lib.solaris-2.10-sun4u-2.6/matplotlib/tests/baseline_images/test_ simplification copying lib/matplotlib/tests/baseline_images/test_simplification/clipping_diamon d.svg -> build/lib.solaris-2.10-sun4u-2.6/matplotlib/tests/baseline_images/test_ simplification copying lib/matplotlib/tests/baseline_images/test_simplification/fft_peaks.pdf - > build/lib.solaris-2.10-sun4u-2.6/matplotlib/tests/baseline_images/test_simplif ication copying lib/matplotlib/tests/baseline_images/test_simplification/fft_peaks.png - > build/lib.solaris-2.10-sun4u-2.6/matplotlib/tests/baseline_images/test_simplif ication copying lib/matplotlib/tests/baseline_images/test_simplification/fft_peaks.svg - > build/lib.solaris-2.10-sun4u-2.6/matplotlib/tests/baseline_images/test_simplif ication copying lib/matplotlib/tests/baseline_images/test_simplification/hatch_simplify. pdf -> build/lib.solaris-2.10-sun4u-2.6/matplotlib/tests/baseline_images/test_si mplification copying lib/matplotlib/tests/baseline_images/test_simplification/hatch_simplify. png -> build/lib.solaris-2.10-sun4u-2.6/matplotlib/tests/baseline_images/test_si mplification copying lib/matplotlib/tests/baseline_images/test_simplification/hatch_simplify. svg -> build/lib.solaris-2.10-sun4u-2.6/matplotlib/tests/baseline_images/test_si mplification copying lib/matplotlib/tests/baseline_images/test_simplification/overflow.pdf -> build/lib.solaris-2.10-sun4u-2.6/matplotlib/tests/baseline_images/test_simplifi cation copying lib/matplotlib/tests/baseline_images/test_simplification/overflow.png -> build/lib.solaris-2.10-sun4u-2.6/matplotlib/tests/baseline_images/test_simplifi cation copying lib/matplotlib/tests/baseline_images/test_simplification/overflow.svg -> build/lib.solaris-2.10-sun4u-2.6/matplotlib/tests/baseline_images/test_simplifi cation copying lib/matplotlib/tests/baseline_images/test_simplification/simplify_curve. pdf -> build/lib.solaris-2.10-sun4u-2.6/matplotlib/tests/baseline_images/test_si mplification copying lib/matplotlib/tests/baseline_images/test_simplification/simplify_curve. png -> build/lib.solaris-2.10-sun4u-2.6/matplotlib/tests/baseline_images/test_si mplification copying lib/matplotlib/tests/baseline_images/test_simplification/simplify_curve. svg -> build/lib.solaris-2.10-sun4u-2.6/matplotlib/tests/baseline_images/test_si mplification creating build/lib.solaris-2.10-sun4u-2.6/matplotlib/tests/baseline_images/test_ spines copying lib/matplotlib/tests/baseline_images/test_spines/spines_axes_positions.p df -> build/lib.solaris-2.10-sun4u-2.6/matplotlib/tests/baseline_images/test_spi nes copying lib/matplotlib/tests/baseline_images/test_spines/spines_axes_positions.p ng -> build/lib.solaris-2.10-sun4u-2.6/matplotlib/tests/baseline_images/test_spi nes copying lib/matplotlib/tests/baseline_images/test_spines/spines_axes_positions.s vg -> build/lib.solaris-2.10-sun4u-2.6/matplotlib/tests/baseline_images/test_spi nes creating build/lib.solaris-2.10-sun4u-2.6/matplotlib/tests/baseline_images/test_ text copying lib/matplotlib/tests/baseline_images/test_text/font_styles.pdf -> build/ lib.solaris-2.10-sun4u-2.6/matplotlib/tests/baseline_images/test_text copying lib/matplotlib/tests/baseline_images/test_text/font_styles.png -> build/ lib.solaris-2.10-sun4u-2.6/matplotlib/tests/baseline_images/test_text copying lib/matplotlib/tests/baseline_images/test_text/font_styles.svg -> build/ lib.solaris-2.10-sun4u-2.6/matplotlib/tests/baseline_images/test_text copying lib/matplotlib/tests/baseline_images/test_text/multiline.pdf -> build/li b.solaris-2.10-sun4u-2.6/matplotlib/tests/baseline_images/test_text copying lib/matplotlib/tests/baseline_images/test_text/multiline.png -> build/li b.solaris-2.10-sun4u-2.6/matplotlib/tests/baseline_images/test_text copying lib/matplotlib/tests/baseline_images/test_text/multiline.svg -> build/li b.solaris-2.10-sun4u-2.6/matplotlib/tests/baseline_images/test_text copying lib/dateutil/zoneinfo/zoneinfo-2010g.tar.gz -> build/lib.solaris-2.10-su n4u-2.6/dateutil/zoneinfo running build_ext building 'matplotlib.ft2font' extension creating build/temp.solaris-2.10-sun4u-2.6 creating build/temp.solaris-2.10-sun4u-2.6/src creating build/temp.solaris-2.10-sun4u-2.6/CXX gcc -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_XOPEN_SOURCE -fPIC -DPY _ARRAY_UNIQUE_SYMBOL=MPL_ARRAY_API -DPYCXX_ISO_CPP_LIB=1 -I/export/home/drkirkby /32/sage-4.4.3/local/lib/python2.6/site-packages/numpy/core/include -I/export/ho me/drkirkby/32/sage-4.4.3/local/include/freetype2 -I/export/home/drkirkby/32/sag e-4.4.3/local/include -I/export/home/drkirkby/32/sage-4.4.3/local/include -I. -I /export/home/drkirkby/32/sage-4.4.3/local/include/python2.6 -c src/ft2font.cpp - o build/temp.solaris-2.10-sun4u-2.6/src/ft2font.o cc1plus: warning: command line option "-Wstrict-prototypes" is valid for Ada/C/O bjC but not for C++ <command-line>: warning: "_XOPEN_SOURCE" redefined <built-in>: warning: this is the location of the previous definition In file included from /export/home/drkirkby/32/sage-4.4.3/local/include/python2. 6/Python.h:8, from ./CXX/WrapPython.h:58, from ./CXX/Extensions.hxx:37, from src/ft2font.h:4, from src/ft2font.cpp:1: /export/home/drkirkby/32/sage-4.4.3/local/include/python2.6/pyconfig.h:1013:1: w arning: "_FILE_OFFSET_BITS" redefined In file included from /usr/include/sys/time.h:24, from ./CXX/WrapPython.h:43, from ./CXX/Extensions.hxx:37, from src/ft2font.h:4, from src/ft2font.cpp:1: /usr/local/gcc-4.4.3/lib/gcc/sparc-sun-solaris2.10/4.4.3/include-fixed/sys/featu re_tests.h:197:1: warning: this is the location of the previous definition src/ft2font.cpp: In member function 'Py::Object FT2Font::get_sfnt_table(const Py ::Tuple&)': src/ft2font.cpp:1569: warning: dereferencing type-punned pointer will break stri ct-aliasing rules src/ft2font.cpp:1572: warning: dereferencing type-punned pointer will break stri ct-aliasing rules src/ft2font.cpp:1597: warning: dereferencing type-punned pointer will break stri ct-aliasing rules src/ft2font.cpp:1661: warning: dereferencing type-punned pointer will break stri ct-aliasing rules src/ft2font.cpp:1684: warning: dereferencing type-punned pointer will break stri ct-aliasing rules src/ft2font.cpp:1705: warning: dereferencing type-punned pointer will break stri ct-aliasing rules src/ft2font.cpp:1708: warning: dereferencing type-punned pointer will break stri ct-aliasing rules src/ft2font.cpp:1725: warning: dereferencing type-punned pointer will break stri ct-aliasing rules gcc -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_XOPEN_SOURCE -fPIC -DPY _ARRAY_UNIQUE_SYMBOL=MPL_ARRAY_API -DPYCXX_ISO_CPP_LIB=1 -I/export/home/drkirkby /32/sage-4.4.3/local/lib/python2.6/site-packages/numpy/core/include -I/export/ho me/drkirkby/32/sage-4.4.3/local/include/freetype2 -I/export/home/drkirkby/32/sag e-4.4.3/local/include -I/export/home/drkirkby/32/sage-4.4.3/local/include -I. -I /export/home/drkirkby/32/sage-4.4.3/local/include/python2.6 -c src/mplutils.cpp -o build/temp.solaris-2.10-sun4u-2.6/src/mplutils.o cc1plus: warning: command line option "-Wstrict-prototypes" is valid for Ada/C/O bjC but not for C++ <command-line>: warning: "_XOPEN_SOURCE" redefined <built-in>: warning: this is the location of the previous definition gcc -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_XOPEN_SOURCE -fPIC -DPY _ARRAY_UNIQUE_SYMBOL=MPL_ARRAY_API -DPYCXX_ISO_CPP_LIB=1 -I/export/home/drkirkby /32/sage-4.4.3/local/lib/python2.6/site-packages/numpy/core/include -I/export/ho me/drkirkby/32/sage-4.4.3/local/include/freetype2 -I/export/home/drkirkby/32/sag e-4.4.3/local/include -I/export/home/drkirkby/32/sage-4.4.3/local/include -I. -I /export/home/drkirkby/32/sage-4.4.3/local/include/python2.6 -c CXX/cxx_extension s.cxx -o build/temp.solaris-2.10-sun4u-2.6/CXX/cxx_extensions.o cc1plus: warning: command line option "-Wstrict-prototypes" is valid for Ada/C/O bjC but not for C++ <command-line>: warning: "_XOPEN_SOURCE" redefined <built-in>: warning: this is the location of the previous definition In file included from /export/home/drkirkby/32/sage-4.4.3/local/include/python2. 6/Python.h:8, from ./CXX/WrapPython.h:58, from CXX/cxx_extensions.cxx:37: /export/home/drkirkby/32/sage-4.4.3/local/include/python2.6/pyconfig.h:1013:1: w arning: "_FILE_OFFSET_BITS" redefined In file included from /usr/include/sys/time.h:24, from ./CXX/WrapPython.h:43, from CXX/cxx_extensions.cxx:37: /usr/local/gcc-4.4.3/lib/gcc/sparc-sun-solaris2.10/4.4.3/include-fixed/sys/featu re_tests.h:197:1: warning: this is the location of the previous definition gcc -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_XOPEN_SOURCE -fPIC -DPY _ARRAY_UNIQUE_SYMBOL=MPL_ARRAY_API -DPYCXX_ISO_CPP_LIB=1 -I/export/home/drkirkby /32/sage-4.4.3/local/lib/python2.6/site-packages/numpy/core/include -I/export/ho me/drkirkby/32/sage-4.4.3/local/include/freetype2 -I/export/home/drkirkby/32/sag e-4.4.3/local/include -I/export/home/drkirkby/32/sage-4.4.3/local/include -I. -I /export/home/drkirkby/32/sage-4.4.3/local/include/python2.6 -c CXX/cxxsupport.cx x -o build/temp.solaris-2.10-sun4u-2.6/CXX/cxxsupport.o cc1plus: warning: command line option "-Wstrict-prototypes" is valid for Ada/C/O bjC but not for C++ <command-line>: warning: "_XOPEN_SOURCE" redefined <built-in>: warning: this is the location of the previous definition In file included from /export/home/drkirkby/32/sage-4.4.3/local/include/python2. 6/Python.h:8, from ./CXX/WrapPython.h:58, from CXX/cxxsupport.cxx:37: /export/home/drkirkby/32/sage-4.4.3/local/include/python2.6/pyconfig.h:1013:1: w arning: "_FILE_OFFSET_BITS" redefined In file included from /usr/include/sys/time.h:24, from ./CXX/WrapPython.h:43, from CXX/cxxsupport.cxx:37: /usr/local/gcc-4.4.3/lib/gcc/sparc-sun-solaris2.10/4.4.3/include-fixed/sys/featu re_tests.h:197:1: warning: this is the location of the previous definition gcc -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_XOPEN_SOURCE -fPIC -DPY _ARRAY_UNIQUE_SYMBOL=MPL_ARRAY_API -DPYCXX_ISO_CPP_LIB=1 -I/export/home/drkirkby /32/sage-4.4.3/local/lib/python2.6/site-packages/numpy/core/include -I/export/ho me/drkirkby/32/sage-4.4.3/local/include/freetype2 -I/export/home/drkirkby/32/sag e-4.4.3/local/include -I/export/home/drkirkby/32/sage-4.4.3/local/include -I. -I /export/home/drkirkby/32/sage-4.4.3/local/include/python2.6 -c CXX/IndirectPytho nInterface.cxx -o build/temp.solaris-2.10-sun4u-2.6/CXX/IndirectPythonInterface. o cc1plus: warning: command line option "-Wstrict-prototypes" is valid for Ada/C/O bjC but not for C++ <command-line>: warning: "_XOPEN_SOURCE" redefined <built-in>: warning: this is the location of the previous definition In file included from /export/home/drkirkby/32/sage-4.4.3/local/include/python2. 6/Python.h:8, from ./CXX/WrapPython.h:58, from CXX/IndirectPythonInterface.cxx:37: /export/home/drkirkby/32/sage-4.4.3/local/include/python2.6/pyconfig.h:1013:1: w arning: "_FILE_OFFSET_BITS" redefined In file included from /usr/include/sys/time.h:24, from ./CXX/WrapPython.h:43, from CXX/IndirectPythonInterface.cxx:37: /usr/local/gcc-4.4.3/lib/gcc/sparc-sun-solaris2.10/4.4.3/include-fixed/sys/featu re_tests.h:197:1: warning: this is the location of the previous definition gcc -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_XOPEN_SOURCE -fPIC -DPY _ARRAY_UNIQUE_SYMBOL=MPL_ARRAY_API -DPYCXX_ISO_CPP_LIB=1 -I/export/home/drkirkby /32/sage-4.4.3/local/lib/python2.6/site-packages/numpy/core/include -I/export/ho me/drkirkby/32/sage-4.4.3/local/include/freetype2 -I/export/home/drkirkby/32/sag e-4.4.3/local/include -I/export/home/drkirkby/32/sage-4.4.3/local/include -I. -I /export/home/drkirkby/32/sage-4.4.3/local/include/python2.6 -c CXX/cxxextensions .c -o build/temp.solaris-2.10-sun4u-2.6/CXX/cxxextensions.o In file included from /export/home/drkirkby/32/sage-4.4.3/local/include/python2. 6/Python.h:8, from ./CXX/WrapPython.h:58, from CXX/cxxextensions.c:37: /export/home/drkirkby/32/sage-4.4.3/local/include/python2.6/pyconfig.h:1013:1: w arning: "_FILE_OFFSET_BITS" redefined In file included from /usr/include/sys/time.h:24, from ./CXX/WrapPython.h:43, from CXX/cxxextensions.c:37: /usr/local/gcc-4.4.3/lib/gcc/sparc-sun-solaris2.10/4.4.3/include-fixed/sys/featu re_tests.h:197:1: warning: this is the location of the previous definition In file included from /usr/include/sys/wait.h:23, from /usr/include/stdlib.h:22, from /export/home/drkirkby/32/sage-4.4.3/local/include/python2. 6/Python.h:42, from ./CXX/WrapPython.h:58, from CXX/cxxextensions.c:37: /usr/include/sys/resource.h:146: error: field 'ru_utime' has incomplete type /usr/include/sys/resource.h:147: error: field 'ru_stime' has incomplete type In file included from /usr/include/sys/termio.h:13, from /export/home/drkirkby/32/sage-4.4.3/local/include/python2. 6/pyport.h:472, from /export/home/drkirkby/32/sage-4.4.3/local/include/python2. 6/Python.h:58, from ./CXX/WrapPython.h:58, from CXX/cxxextensions.c:37: /usr/include/sys/termios.h:375: error: field 'tv' has incomplete type error: command 'gcc' failed with exit status 1 Error building matplotlib package. real 0m51.119s user 0m47.346s sys 0m3.132s sage: An error occurred while installing matplotlib-0.99.3-svn8415-with-D_XOPEN_ SOURCE Please email sage-devel http://groups.google.com/group/sage-devel explaining the problem and send the relevant part of |
