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<section id="meanshift">
<h1>MeanShift<a class="headerlink" href="#meanshift" title="Link to this heading">#</a></h1>
<dl class="py class">
<dt class="sig sig-object py" id="sklearn.cluster.MeanShift">
<em class="property"><span class="pre">class</span><span class="w"> </span></em><span class="sig-prename descclassname"><span class="pre">sklearn.cluster.</span></span><span class="sig-name descname"><span class="pre">MeanShift</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="o"><span class="pre">*</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">bandwidth</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">None</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">seeds</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">None</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">bin_seeding</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">False</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">min_bin_freq</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">1</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">cluster_all</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">True</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">n_jobs</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">None</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">max_iter</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">300</span></span></em><span class="sig-paren">)</span><a class="reference external" href="https://github.com/scikit-learn/scikit-learn/blob/4ee3afa55/sklearn/cluster/_mean_shift.py#L300"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#sklearn.cluster.MeanShift" title="Link to this definition">#</a></dt>
<dd><p>Mean shift clustering using a flat kernel.</p>
<p>Mean shift clustering aims to discover “blobs” in a smooth density of
samples. It is a centroid-based algorithm, which works by updating
candidates for centroids to be the mean of the points within a given
region. These candidates are then filtered in a post-processing stage to
eliminate near-duplicates to form the final set of centroids.</p>
<p>Seeding is performed using a binning technique for scalability.</p>
<p>For an example of how to use MeanShift clustering, refer to:
<a class="reference internal" href="../../auto_examples/cluster/plot_mean_shift.html#sphx-glr-auto-examples-cluster-plot-mean-shift-py"><span class="std std-ref">A demo of the mean-shift clustering algorithm</span></a>.</p>
<p>Read more in the <a class="reference internal" href="../clustering.html#mean-shift"><span class="std std-ref">User Guide</span></a>.</p>
<dl class="field-list">
<dt class="field-odd">Parameters<span class="colon">:</span></dt>
<dd class="field-odd"><dl>
<dt><strong>bandwidth</strong><span class="classifier">float, default=None</span></dt><dd><p>Bandwidth used in the flat kernel.</p>
<p>If not given, the bandwidth is estimated using
sklearn.cluster.estimate_bandwidth; see the documentation for that
function for hints on scalability (see also the Notes, below).</p>
</dd>
<dt><strong>seeds</strong><span class="classifier">array-like of shape (n_samples, n_features), default=None</span></dt><dd><p>Seeds used to initialize kernels. If not set,
the seeds are calculated by clustering.get_bin_seeds
with bandwidth as the grid size and default values for
other parameters.</p>
</dd>
<dt><strong>bin_seeding</strong><span class="classifier">bool, default=False</span></dt><dd><p>If true, initial kernel locations are not locations of all
points, but rather the location of the discretized version of
points, where points are binned onto a grid whose coarseness
corresponds to the bandwidth. Setting this option to True will speed
up the algorithm because fewer seeds will be initialized.
The default value is False.
Ignored if seeds argument is not None.</p>
</dd>
<dt><strong>min_bin_freq</strong><span class="classifier">int, default=1</span></dt><dd><p>To speed up the algorithm, accept only those bins with at least
min_bin_freq points as seeds.</p>
</dd>
<dt><strong>cluster_all</strong><span class="classifier">bool, default=True</span></dt><dd><p>If true, then all points are clustered, even those orphans that are
not within any kernel. Orphans are assigned to the nearest kernel.
If false, then orphans are given cluster label -1.</p>
</dd>
<dt><strong>n_jobs</strong><span class="classifier">int, default=None</span></dt><dd><p>The number of jobs to use for the computation. The following tasks benefit
from the parallelization:</p>
<ul class="simple">
<li><p>The search of nearest neighbors for bandwidth estimation and label
assignments. See the details in the docstring of the
<code class="docutils literal notranslate"><span class="pre">NearestNeighbors</span></code> class.</p></li>
<li><p>Hill-climbing optimization for all seeds.</p></li>
</ul>
<p>See <a class="reference internal" href="../../glossary.html#term-n_jobs"><span class="xref std std-term">Glossary</span></a> for more details.</p>
<p><code class="docutils literal notranslate"><span class="pre">None</span></code> means 1 unless in a <a class="reference external" href="https://joblib.readthedocs.io/en/latest/generated/joblib.parallel_backend.html#joblib.parallel_backend" title="(in joblib v1.5.dev0)"><code class="xref py py-obj docutils literal notranslate"><span class="pre">joblib.parallel_backend</span></code></a> context.
<code class="docutils literal notranslate"><span class="pre">-1</span></code> means using all processors. See <a class="reference internal" href="../../glossary.html#term-n_jobs"><span class="xref std std-term">Glossary</span></a>
for more details.</p>
</dd>
<dt><strong>max_iter</strong><span class="classifier">int, default=300</span></dt><dd><p>Maximum number of iterations, per seed point before the clustering
operation terminates (for that seed point), if has not converged yet.</p>
<div class="versionadded">
<p><span class="versionmodified added">Added in version 0.22.</span></p>
</div>
</dd>
</dl>
</dd>
<dt class="field-even">Attributes<span class="colon">:</span></dt>
<dd class="field-even"><dl>
<dt><strong>cluster_centers_</strong><span class="classifier">ndarray of shape (n_clusters, n_features)</span></dt><dd><p>Coordinates of cluster centers.</p>
</dd>
<dt><strong>labels_</strong><span class="classifier">ndarray of shape (n_samples,)</span></dt><dd><p>Labels of each point.</p>
</dd>
<dt><strong>n_iter_</strong><span class="classifier">int</span></dt><dd><p>Maximum number of iterations performed on each seed.</p>
<div class="versionadded">
<p><span class="versionmodified added">Added in version 0.22.</span></p>
</div>
</dd>
<dt><strong>n_features_in_</strong><span class="classifier">int</span></dt><dd><p>Number of features seen during <a class="reference internal" href="../../glossary.html#term-fit"><span class="xref std std-term">fit</span></a>.</p>
<div class="versionadded">
<p><span class="versionmodified added">Added in version 0.24.</span></p>
</div>
</dd>
<dt><strong>feature_names_in_</strong><span class="classifier">ndarray of shape (<code class="docutils literal notranslate"><span class="pre">n_features_in_</span></code>,)</span></dt><dd><p>Names of features seen during <a class="reference internal" href="../../glossary.html#term-fit"><span class="xref std std-term">fit</span></a>. Defined only when <code class="docutils literal notranslate"><span class="pre">X</span></code>
has feature names that are all strings.</p>
<div class="versionadded">
<p><span class="versionmodified added">Added in version 1.0.</span></p>
</div>
</dd>
</dl>
</dd>
</dl>
<div class="admonition seealso">
<p class="admonition-title">See also</p>
<dl class="simple">
<dt><a class="reference internal" href="sklearn.cluster.KMeans.html#sklearn.cluster.KMeans" title="sklearn.cluster.KMeans"><code class="xref py py-obj docutils literal notranslate"><span class="pre">KMeans</span></code></a></dt><dd><p>K-Means clustering.</p>
</dd>
</dl>
</div>
<p class="rubric">Notes</p>
<p>Scalability:</p>
<p>Because this implementation uses a flat kernel and
a Ball Tree to look up members of each kernel, the complexity will tend
towards O(T*n*log(n)) in lower dimensions, with n the number of samples
and T the number of points. In higher dimensions the complexity will
tend towards O(T*n^2).</p>
<p>Scalability can be boosted by using fewer seeds, for example by using
a higher value of min_bin_freq in the get_bin_seeds function.</p>
<p>Note that the estimate_bandwidth function is much less scalable than the
mean shift algorithm and will be the bottleneck if it is used.</p>
<p class="rubric">References</p>
<p>Dorin Comaniciu and Peter Meer, “Mean Shift: A robust approach toward
feature space analysis”. IEEE Transactions on Pattern Analysis and
Machine Intelligence. 2002. pp. 603-619.</p>
<p class="rubric">Examples</p>
<div class="doctest highlight-default notranslate"><div class="highlight"><pre><span></span><span class="gp">>>> </span><span class="kn">from</span> <span class="nn">sklearn.cluster</span> <span class="kn">import</span> <span class="n">MeanShift</span>
<span class="gp">>>> </span><span class="kn">import</span> <span class="nn">numpy</span> <span class="k">as</span> <span class="nn">np</span>
<span class="gp">>>> </span><span class="n">X</span> <span class="o">=</span> <span class="n">np</span><span class="o">.</span><span class="n">array</span><span class="p">([[</span><span class="mi">1</span><span class="p">,</span> <span class="mi">1</span><span class="p">],</span> <span class="p">[</span><span class="mi">2</span><span class="p">,</span> <span class="mi">1</span><span class="p">],</span> <span class="p">[</span><span class="mi">1</span><span class="p">,</span> <span class="mi">0</span><span class="p">],</span>
<span class="gp">... </span> <span class="p">[</span><span class="mi">4</span><span class="p">,</span> <span class="mi">7</span><span class="p">],</span> <span class="p">[</span><span class="mi">3</span><span class="p">,</span> <span class="mi">5</span><span class="p">],</span> <span class="p">[</span><span class="mi">3</span><span class="p">,</span> <span class="mi">6</span><span class="p">]])</span>
<span class="gp">>>> </span><span class="n">clustering</span> <span class="o">=</span> <span class="n">MeanShift</span><span class="p">(</span><span class="n">bandwidth</span><span class="o">=</span><span class="mi">2</span><span class="p">)</span><span class="o">.</span><span class="n">fit</span><span class="p">(</span><span class="n">X</span><span class="p">)</span>
<span class="gp">>>> </span><span class="n">clustering</span><span class="o">.</span><span class="n">labels_</span>
<span class="go">array([1, 1, 1, 0, 0, 0])</span>
<span class="gp">>>> </span><span class="n">clustering</span><span class="o">.</span><span class="n">predict</span><span class="p">([[</span><span class="mi">0</span><span class="p">,</span> <span class="mi">0</span><span class="p">],</span> <span class="p">[</span><span class="mi">5</span><span class="p">,</span> <span class="mi">5</span><span class="p">]])</span>
<span class="go">array([1, 0])</span>
<span class="gp">>>> </span><span class="n">clustering</span>
<span class="go">MeanShift(bandwidth=2)</span>
</pre></div>
</div>
<dl class="py method">
<dt class="sig sig-object py" id="sklearn.cluster.MeanShift.fit">
<span class="sig-name descname"><span class="pre">fit</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">X</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">y</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">None</span></span></em><span class="sig-paren">)</span><a class="reference external" href="https://github.com/scikit-learn/scikit-learn/blob/4ee3afa55/sklearn/cluster/_mean_shift.py#L466"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#sklearn.cluster.MeanShift.fit" title="Link to this definition">#</a></dt>
<dd><p>Perform clustering.</p>
<dl class="field-list simple">
<dt class="field-odd">Parameters<span class="colon">:</span></dt>
<dd class="field-odd"><dl class="simple">
<dt><strong>X</strong><span class="classifier">array-like of shape (n_samples, n_features)</span></dt><dd><p>Samples to cluster.</p>
</dd>
<dt><strong>y</strong><span class="classifier">Ignored</span></dt><dd><p>Not used, present for API consistency by convention.</p>
</dd>
</dl>
</dd>
<dt class="field-even">Returns<span class="colon">:</span></dt>
<dd class="field-even"><dl class="simple">
<dt><strong>self</strong><span class="classifier">object</span></dt><dd><p>Fitted instance.</p>
</dd>
</dl>
</dd>
</dl>
</dd></dl>
<dl class="py method">
<dt class="sig sig-object py" id="sklearn.cluster.MeanShift.fit_predict">
<span class="sig-name descname"><span class="pre">fit_predict</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">X</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">y</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">None</span></span></em>, <em class="sig-param"><span class="o"><span class="pre">**</span></span><span class="n"><span class="pre">kwargs</span></span></em><span class="sig-paren">)</span><a class="reference external" href="https://github.com/scikit-learn/scikit-learn/blob/4ee3afa55/sklearn/base.py#L597"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#sklearn.cluster.MeanShift.fit_predict" title="Link to this definition">#</a></dt>
<dd><p>Perform clustering on <code class="docutils literal notranslate"><span class="pre">X</span></code> and returns cluster labels.</p>
<dl class="field-list">
<dt class="field-odd">Parameters<span class="colon">:</span></dt>
<dd class="field-odd"><dl>
<dt><strong>X</strong><span class="classifier">array-like of shape (n_samples, n_features)</span></dt><dd><p>Input data.</p>
</dd>
<dt><strong>y</strong><span class="classifier">Ignored</span></dt><dd><p>Not used, present for API consistency by convention.</p>
</dd>
<dt><strong>**kwargs</strong><span class="classifier">dict</span></dt><dd><p>Arguments to be passed to <code class="docutils literal notranslate"><span class="pre">fit</span></code>.</p>
<div class="versionadded">
<p><span class="versionmodified added">Added in version 1.4.</span></p>
</div>
</dd>
</dl>
</dd>
<dt class="field-even">Returns<span class="colon">:</span></dt>
<dd class="field-even"><dl class="simple">
<dt><strong>labels</strong><span class="classifier">ndarray of shape (n_samples,), dtype=np.int64</span></dt><dd><p>Cluster labels.</p>
</dd>
</dl>
</dd>
</dl>
</dd></dl>
<dl class="py method">
<dt class="sig sig-object py" id="sklearn.cluster.MeanShift.get_metadata_routing">
<span class="sig-name descname"><span class="pre">get_metadata_routing</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference external" href="https://github.com/scikit-learn/scikit-learn/blob/4ee3afa55/sklearn/utils/_metadata_requests.py#L1497"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#sklearn.cluster.MeanShift.get_metadata_routing" title="Link to this definition">#</a></dt>
<dd><p>Get metadata routing of this object.</p>
<p>Please check <a class="reference internal" href="../../metadata_routing.html#metadata-routing"><span class="std std-ref">User Guide</span></a> on how the routing
mechanism works.</p>
<dl class="field-list simple">
<dt class="field-odd">Returns<span class="colon">:</span></dt>
<dd class="field-odd"><dl class="simple">
<dt><strong>routing</strong><span class="classifier">MetadataRequest</span></dt><dd><p>A <a class="reference internal" href="sklearn.utils.metadata_routing.MetadataRequest.html#sklearn.utils.metadata_routing.MetadataRequest" title="sklearn.utils.metadata_routing.MetadataRequest"><code class="xref py py-class docutils literal notranslate"><span class="pre">MetadataRequest</span></code></a> encapsulating
routing information.</p>
</dd>
</dl>
</dd>
</dl>
</dd></dl>
<dl class="py method">
<dt class="sig sig-object py" id="sklearn.cluster.MeanShift.get_params">
<span class="sig-name descname"><span class="pre">get_params</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">deep</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">True</span></span></em><span class="sig-paren">)</span><a class="reference external" href="https://github.com/scikit-learn/scikit-learn/blob/4ee3afa55/sklearn/base.py#L221"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#sklearn.cluster.MeanShift.get_params" title="Link to this definition">#</a></dt>
<dd><p>Get parameters for this estimator.</p>
<dl class="field-list simple">
<dt class="field-odd">Parameters<span class="colon">:</span></dt>
<dd class="field-odd"><dl class="simple">
<dt><strong>deep</strong><span class="classifier">bool, default=True</span></dt><dd><p>If True, will return the parameters for this estimator and
contained subobjects that are estimators.</p>
</dd>
</dl>
</dd>
<dt class="field-even">Returns<span class="colon">:</span></dt>
<dd class="field-even"><dl class="simple">
<dt><strong>params</strong><span class="classifier">dict</span></dt><dd><p>Parameter names mapped to their values.</p>
</dd>
</dl>
</dd>
</dl>
</dd></dl>
<dl class="py method">
<dt class="sig sig-object py" id="sklearn.cluster.MeanShift.predict">
<span class="sig-name descname"><span class="pre">predict</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">X</span></span></em><span class="sig-paren">)</span><a class="reference external" href="https://github.com/scikit-learn/scikit-learn/blob/4ee3afa55/sklearn/cluster/_mean_shift.py#L560"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#sklearn.cluster.MeanShift.predict" title="Link to this definition">#</a></dt>
<dd><p>Predict the closest cluster each sample in X belongs to.</p>
<dl class="field-list simple">
<dt class="field-odd">Parameters<span class="colon">:</span></dt>
<dd class="field-odd"><dl class="simple">
<dt><strong>X</strong><span class="classifier">array-like of shape (n_samples, n_features)</span></dt><dd><p>New data to predict.</p>
</dd>
</dl>
</dd>
<dt class="field-even">Returns<span class="colon">:</span></dt>
<dd class="field-even"><dl class="simple">
<dt><strong>labels</strong><span class="classifier">ndarray of shape (n_samples,)</span></dt><dd><p>Index of the cluster each sample belongs to.</p>
</dd>
</dl>
</dd>
</dl>
</dd></dl>
<dl class="py method">
<dt class="sig sig-object py" id="sklearn.cluster.MeanShift.set_params">
<span class="sig-name descname"><span class="pre">set_params</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="o"><span class="pre">**</span></span><span class="n"><span class="pre">params</span></span></em><span class="sig-paren">)</span><a class="reference external" href="https://github.com/scikit-learn/scikit-learn/blob/4ee3afa55/sklearn/base.py#L245"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#sklearn.cluster.MeanShift.set_params" title="Link to this definition">#</a></dt>
<dd><p>Set the parameters of this estimator.</p>
<p>The method works on simple estimators as well as on nested objects
(such as <a class="reference internal" href="sklearn.pipeline.Pipeline.html#sklearn.pipeline.Pipeline" title="sklearn.pipeline.Pipeline"><code class="xref py py-class docutils literal notranslate"><span class="pre">Pipeline</span></code></a>). The latter have
parameters of the form <code class="docutils literal notranslate"><span class="pre"><component>__<parameter></span></code> so that it’s
possible to update each component of a nested object.</p>
<dl class="field-list simple">
<dt class="field-odd">Parameters<span class="colon">:</span></dt>
<dd class="field-odd"><dl class="simple">
<dt><strong>**params</strong><span class="classifier">dict</span></dt><dd><p>Estimator parameters.</p>
</dd>
</dl>
</dd>
<dt class="field-even">Returns<span class="colon">:</span></dt>
<dd class="field-even"><dl class="simple">
<dt><strong>self</strong><span class="classifier">estimator instance</span></dt><dd><p>Estimator instance.</p>
</dd>
</dl>
</dd>
</dl>
</dd></dl>
</dd></dl>
<section id="gallery-examples">
<h2>Gallery examples<a class="headerlink" href="#gallery-examples" title="Link to this heading">#</a></h2>
<div class="sphx-glr-thumbnails"><div class="sphx-glr-thumbcontainer" tooltip="Reference:"><img alt="" src="../../_images/sphx_glr_plot_mean_shift_thumb.png" />
<p><a class="reference internal" href="../../auto_examples/cluster/plot_mean_shift.html#sphx-glr-auto-examples-cluster-plot-mean-shift-py"><span class="std std-ref">A demo of the mean-shift clustering algorithm</span></a></p>
<div class="sphx-glr-thumbnail-title">A demo of the mean-shift clustering algorithm</div>
</div><div class="sphx-glr-thumbcontainer" tooltip="This example shows characteristics of different clustering algorithms on datasets that are "interesting" but still in 2D. With the exception of the last dataset, the parameters of each of these dataset-algorithm pairs has been tuned to produce good clustering results. Some algorithms are more sensitive to parameter values than others."><img alt="" src="../../_images/sphx_glr_plot_cluster_comparison_thumb.png" />
<p><a class="reference internal" href="../../auto_examples/cluster/plot_cluster_comparison.html#sphx-glr-auto-examples-cluster-plot-cluster-comparison-py"><span class="std std-ref">Comparing different clustering algorithms on toy datasets</span></a></p>
<div class="sphx-glr-thumbnail-title">Comparing different clustering algorithms on toy datasets</div>
</div></div></section>
</section>
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<li class="toc-h2 nav-item toc-entry"><a class="reference internal nav-link" href="#sklearn.cluster.MeanShift"><code class="docutils literal notranslate"><span class="pre">MeanShift</span></code></a><ul class="nav section-nav flex-column visible">
<li class="toc-h3 nav-item toc-entry"><a class="reference internal nav-link" href="#sklearn.cluster.MeanShift.fit"><code class="docutils literal notranslate"><span class="pre">fit</span></code></a></li>
<li class="toc-h3 nav-item toc-entry"><a class="reference internal nav-link" href="#sklearn.cluster.MeanShift.fit_predict"><code class="docutils literal notranslate"><span class="pre">fit_predict</span></code></a></li>
<li class="toc-h3 nav-item toc-entry"><a class="reference internal nav-link" href="#sklearn.cluster.MeanShift.get_metadata_routing"><code class="docutils literal notranslate"><span class="pre">get_metadata_routing</span></code></a></li>
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