(Q56688818)

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12 November 2019

title

Elastic properties of proteins: insight on the folding process and evolutionary selection of native structures (English)

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12 November 2019

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2

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12 November 2019

author name string

Cristian Micheletti

series ordinal

1

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12 November 2019

Amos Maritan

series ordinal

3

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12 November 2019

language of work or name

English

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publication date

1 August 2002

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Journal of Molecular Biology

12 November 2019

published in

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12 November 2019

volume

321

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12 November 2019

issue

5

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12 November 2019

page(s)

909-921

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A surprising simplicity to protein folding.

12 November 2019

cites work

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2900710-6

Optimal shapes of compact strings.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2900710-6

Geometry and physics of proteins.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2900710-6

Vibrational normal-mode spectrum of globular proteins

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2900710-6

Contact order, transition state placement and the refolding rates of single domain proteins.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2900710-6

Protein folding. Matching speed and locality.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2900710-6

Protein flexibility predictions using graph theory

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2900710-6

Protein unfolding: rigidity lost

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2900710-6

Large Amplitude Elastic Motions in Proteins from a Single-Parameter, Atomic Analysis

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2900710-6

A theoretical search for folding/unfolding nuclei in three-dimensional protein structures

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2900710-6

A statistical mechanical model for beta-hairpin kinetics.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2900710-6

Prediction of protein-folding mechanisms from free-energy landscapes derived from native structures

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2900710-6

Native topology determines force-induced unfolding pathways in globular proteins

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2900710-6

Topological and energetic factors: what determines the structural details of the transition state ensemble and "en-route" intermediates for protein folding? An investigation for small globular proteins

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2900710-6

Conformations of proteins in equilibrium.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2900710-6

Is protein folding hierarchic? I. Local structure and peptide folding

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2900710-6

7 January 2021

Laws of form revisited

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2900710-6

Principles that determine the structure of proteins

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2900710-6

Properties and origins of protein secondary structure

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2900710-6

Protein normal-mode dynamics: trypsin inhibitor, crambin, ribonuclease and lysozyme

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2900710-6

Projection of Monte Carlo and molecular dynamics trajectories onto the normal mode axes: human lysozyme

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2900710-6

Essential dynamics of proteins

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2900710-6

Direct evaluation of thermal fluctuations in proteins using a single-parameter harmonic potential

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2900710-6

Gaussian Dynamics of Folded Proteins

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2900710-6

Vibrational Dynamics of Folded Proteins: Significance of Slow and Fast Motions in Relation to Function and Stability

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2900710-6

How do small single-domain proteins fold?

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2900710-6

Absence of Diffusion in Certain Random Lattices

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2900710-6

Normal mode analysis of G-actin

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2900710-6

RNA bulge entropies in the unbound state correlate with peptide binding strengths for HIV-1 and BIV TAR RNA because of improved conformational access

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2900710-6

Correlation between native-state hydrogen exchange and cooperative residue fluctuations from a simple model

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2900710-6

Vibrational dynamics of transfer RNAs: comparison of the free and synthetase-bound forms

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2900710-6

Collective motions in HIV-1 reverse transcriptase: examination of flexibility and enzyme function.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2900710-6

Structure-based analysis of protein dynamics: comparison of theoretical results for hen lysozyme with X-ray diffraction and NMR relaxation data

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2900710-6

Cooperative fluctuations and subunit communication in tryptophan synthase

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2900710-6

Proteins with similar architecture exhibit similar large-scale dynamic behavior

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2900710-6

Anisotropy of fluctuation dynamics of proteins with an elastic network model

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2900710-6

Kinetic nonoptimality and vibrational stability of proteins

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2900710-6

On the use of normal modes in thermal parameter refinement: theory and application to the bovine pancreatic trypsin inhibitor

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2900710-6

Dynamics of large proteins through hierarchical levels of coarse-grained structures.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2900710-6

Flexibility and packing in proteins

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2900710-6

Recurrent oligomers in proteins: an optimal scheme reconciling accurate and concise backbone representations in automated folding and design studies.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2900710-6

The Protein Data Bank: a computer-based archival file for macromolecular structures

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2900710-6

In vivo emergence of HIV-1 variants resistant to multiple protease inhibitors

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2900710-6

Counteracting HIV-1 protease drug resistance: structural analysis of mutant proteases complexed with XV638 and SD146, cyclic urea amides with broad specificities

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2900710-6

HIV protease: enzyme function and drug resistance

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2900710-6

Structure-based inhibitors of HIV-1 protease

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2900710-6

Cross-resistance analysis of human immunodeficiency virus type 1 variants individually selected for resistance to five different protease inhibitors

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2900710-6

Role of conformational fluctuations in the enzymatic reaction of HIV-1 protease

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2900710-6

Folding pathways of prion and doppel

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2900710-6

First principles prediction of protein folding rates

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2900710-6

The roles of stability and contact order in determining protein folding rates.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2900710-6

Theoretical study of a landscape of protein folding-unfolding pathways. Folding rates at midtransition.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2900710-6

"New view" of protein folding reconciled with the old through multiple unfolding simulations.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2900710-6

10.1016/S0022-2836(02)00710-6

7 January 2021

Identifiers

DOI

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:12206770%20AND%20SRC:MED&resulttype=core&format=json

12 November 2019

1 reference