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BASE FLIPPING
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Europe PubMed Central
PubMed publication ID
9759487
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:9759487%20AND%20SRC:MED&resulttype=core&format=json
retrieved
5 December 2019
review article
1 reference
stated in
Europe PubMed Central
title
Base flipping
(English)
1 reference
stated in
Europe PubMed Central
PubMed publication ID
9759487
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:9759487%20AND%20SRC:MED&resulttype=core&format=json
retrieved
5 December 2019
author
Richard Roberts
series ordinal
1
1 reference
stated in
Europe PubMed Central
PubMed publication ID
9759487
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:9759487%20AND%20SRC:MED&resulttype=core&format=json
retrieved
5 December 2019
author name string
Cheng X
series ordinal
2
1 reference
stated in
Europe PubMed Central
PubMed publication ID
9759487
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:9759487%20AND%20SRC:MED&resulttype=core&format=json
retrieved
5 December 2019
publication date
1 January 1998
1 reference
stated in
Europe PubMed Central
PubMed publication ID
9759487
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:9759487%20AND%20SRC:MED&resulttype=core&format=json
retrieved
5 December 2019
number of pages
18
1 reference
based on heuristic
inferred from page(s)
published in
Annual Review of Biochemistry
1 reference
stated in
Europe PubMed Central
PubMed publication ID
9759487
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:9759487%20AND%20SRC:MED&resulttype=core&format=json
retrieved
5 December 2019
volume
67
1 reference
stated in
Europe PubMed Central
PubMed publication ID
9759487
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:9759487%20AND%20SRC:MED&resulttype=core&format=json
retrieved
5 December 2019
issue
1
0 references
page(s)
181-198
1 reference
stated in
Europe PubMed Central
PubMed publication ID
9759487
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:9759487%20AND%20SRC:MED&resulttype=core&format=json
retrieved
5 December 2019
cites work
Structure-guided analysis reveals nine sequence motifs conserved among DNA amino-methyltransferases, and suggests a catalytic mechanism for these enzymes
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Crystal structure of TFIID TATA-box binding protein
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HhaI methyltransferase flips its target base out of the DNA helix
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11 October 2022
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Nucleotide mimicry in the crystal structure of the uracil-DNA glycosylase-uracil glycosylase inhibitor protein complex
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11 October 2022
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Finding a basis for flipping bases.
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11 October 2022
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A new class of uracil-DNA glycosylases related to human thymine-DNA glycosylase
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11 October 2022
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Biological implications of the mechanism of action of human DNA (cytosine-5)methyltransferase
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11 October 2022
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Transcription factors: structural families and principles of DNA recognition
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11 October 2022
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https://opencitations.net/index/coci/api/v1/references/10.1146/ANNUREV.BIOCHEM.67.1.181
HhaI and HpaII DNA methyltransferases bind DNA mismatches, methylate uracil and block DNA repair
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COCI
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11 October 2022
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https://opencitations.net/index/coci/api/v1/references/10.1146/ANNUREV.BIOCHEM.67.1.181
Precluding uracil from DNA
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COCI
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11 October 2022
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https://opencitations.net/index/coci/api/v1/references/10.1146/ANNUREV.BIOCHEM.67.1.181
Crystal structure and mutational analysis of human uracil-DNA glycosylase: structural basis for specificity and catalysis
1 reference
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COCI
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11 October 2022
reference URL
https://opencitations.net/index/coci/api/v1/references/10.1146/ANNUREV.BIOCHEM.67.1.181
DNA-repair enzymes
1 reference
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COCI
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11 October 2022
reference URL
https://opencitations.net/index/coci/api/v1/references/10.1146/ANNUREV.BIOCHEM.67.1.181
M.HhaI binds tightly to substrates containing mismatches at the target base
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COCI
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11 October 2022
reference URL
https://opencitations.net/index/coci/api/v1/references/10.1146/ANNUREV.BIOCHEM.67.1.181
Structure and Function of DNA Methyltransferases
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11 October 2022
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https://opencitations.net/index/coci/api/v1/references/10.1146/ANNUREV.BIOCHEM.67.1.181
Atomic structure of the DNA repair [4Fe-4S] enzyme endonuclease III
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COCI
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11 October 2022
reference URL
https://opencitations.net/index/coci/api/v1/references/10.1146/ANNUREV.BIOCHEM.67.1.181
DNA-protein interactions: IHF--the master bender
1 reference
stated in
COCI
retrieved
11 October 2022
reference URL
https://opencitations.net/index/coci/api/v1/references/10.1146/ANNUREV.BIOCHEM.67.1.181
Three-dimensional structure of a DNA repair enzyme, 3-methyladenine DNA glycosylase II, from Escherichia coli.
1 reference
stated in
COCI
retrieved
11 October 2022
reference URL
https://opencitations.net/index/coci/api/v1/references/10.1146/ANNUREV.BIOCHEM.67.1.181
The structural basis of specific base-excision repair by uracil-DNA glycosylase
1 reference
stated in
COCI
retrieved
11 October 2022
reference URL
https://opencitations.net/index/coci/api/v1/references/10.1146/ANNUREV.BIOCHEM.67.1.181
On base flipping
1 reference
stated in
COCI
retrieved
11 October 2022
reference URL
https://opencitations.net/index/coci/api/v1/references/10.1146/ANNUREV.BIOCHEM.67.1.181
DNA containing 4'-thio-2'-deoxycytidine inhibits methylation by HhaI methyltransferase
1 reference
stated in
COCI
retrieved
11 October 2022
reference URL
https://opencitations.net/index/coci/api/v1/references/10.1146/ANNUREV.BIOCHEM.67.1.181
Co-crystal structure of TBP recognizing the minor groove of a TATA element
1 reference
stated in
COCI
retrieved
11 October 2022
reference URL
https://opencitations.net/index/coci/api/v1/references/10.1146/ANNUREV.BIOCHEM.67.1.181
Crystallographic refinement and structure of DNase I at 2 A resolution
1 reference
stated in
COCI
retrieved
11 October 2022
reference URL
https://opencitations.net/index/coci/api/v1/references/10.1146/ANNUREV.BIOCHEM.67.1.181
A model for DNA binding and enzyme action derived from crystallographic studies of the TaqI N6-adenine-methyltransferase
1 reference
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COCI
retrieved
11 October 2022
reference URL
https://opencitations.net/index/coci/api/v1/references/10.1146/ANNUREV.BIOCHEM.67.1.181
Enzymatic C5-cytosine methylation of DNA: mechanistic implications of new crystal structures for HhaL methyltransferase-DNA-AdoHcy complexes
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COCI
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11 October 2022
reference URL
https://opencitations.net/index/coci/api/v1/references/10.1146/ANNUREV.BIOCHEM.67.1.181
A structural basis for the preferential binding of hemimethylated DNA by HhaI DNA methyltransferase
1 reference
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COCI
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11 October 2022
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https://opencitations.net/index/coci/api/v1/references/10.1146/ANNUREV.BIOCHEM.67.1.181
DNA distortion and base flipping by the EcoRV DNA methyltransferase. A study using interference at dA and T bases and modified deoxynucleosides
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COCI
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11 October 2022
reference URL
https://opencitations.net/index/coci/api/v1/references/10.1146/ANNUREV.BIOCHEM.67.1.181
Structure of pvu II DNA-(cytosine N4) methyltransferase, an example of domain permutation and protein fold assignment
1 reference
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COCI
retrieved
11 October 2022
reference URL
https://opencitations.net/index/coci/api/v1/references/10.1146/ANNUREV.BIOCHEM.67.1.181
Isolation, characterization, and properties of a labile hydrolysis product of the antitumor nucleoside, 5-azacytidine
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COCI
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11 October 2022
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https://opencitations.net/index/coci/api/v1/references/10.1146/ANNUREV.BIOCHEM.67.1.181
Crystal structure of a yeast TBP/TATA-box complex
1 reference
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11 October 2022
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https://opencitations.net/index/coci/api/v1/references/10.1146/ANNUREV.BIOCHEM.67.1.181
Crystal Structure of DNA Photolyase from Escherichia coli
1 reference
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COCI
retrieved
11 October 2022
reference URL
https://opencitations.net/index/coci/api/v1/references/10.1146/ANNUREV.BIOCHEM.67.1.181
Identification of a subdomain within DNA-(cytosine-C5)-methyltransferases responsible for the recognition of the 5' part of their DNA target.
1 reference
stated in
COCI
retrieved
11 October 2022
reference URL
https://opencitations.net/index/coci/api/v1/references/10.1146/ANNUREV.BIOCHEM.67.1.181
DNA modification by methyltransferases
1 reference
stated in
COCI
retrieved
11 October 2022
reference URL
https://opencitations.net/index/coci/api/v1/references/10.1146/ANNUREV.BIOCHEM.67.1.181
Structure of DNA-porphyrin complex
1 reference
stated in
COCI
retrieved
11 October 2022
reference URL
https://opencitations.net/index/coci/api/v1/references/10.1146/ANNUREV.BIOCHEM.67.1.181
Three-dimensional structure of the adenine-specific DNA methyltransferase M.Taq I in complex with the cofactor S-adenosylmethionine
1 reference
stated in
COCI
retrieved
11 October 2022
reference URL
https://opencitations.net/index/coci/api/v1/references/10.1146/ANNUREV.BIOCHEM.67.1.181
Structural basis for the excision repair of alkylation-damaged DNA
1 reference
stated in
COCI
retrieved
11 October 2022
reference URL
https://opencitations.net/index/coci/api/v1/references/10.1146/ANNUREV.BIOCHEM.67.1.181
Universal catalytic domain structure of AdoMet-dependent methyltransferases.
1 reference
stated in
COCI
retrieved
11 October 2022
reference URL
https://opencitations.net/index/coci/api/v1/references/10.1146/ANNUREV.BIOCHEM.67.1.181
Targeted base stacking disruption by the EcoRI DNA methyltransferase
1 reference
stated in
COCI
retrieved
11 October 2022
reference URL
https://opencitations.net/index/coci/api/v1/references/10.1146/ANNUREV.BIOCHEM.67.1.181
Crystal structure of human uracil-DNA glycosylase in complex with a protein inhibitor: protein mimicry of DNA
1 reference
stated in
COCI
retrieved
11 October 2022
reference URL
https://opencitations.net/index/coci/api/v1/references/10.1146/ANNUREV.BIOCHEM.67.1.181
The crystal structure of Haelll methyltransferase covalently complexed to DNA: An extrahelical cytosine and rearranged base pairing
1 reference
stated in
COCI
retrieved
11 October 2022
reference URL
https://opencitations.net/index/coci/api/v1/references/10.1146/ANNUREV.BIOCHEM.67.1.181
A specific endonuclease from Haemophilus haemolyticus
1 reference
stated in
COCI
retrieved
11 October 2022
reference URL
https://opencitations.net/index/coci/api/v1/references/10.1146/ANNUREV.BIOCHEM.67.1.181
How do DNA repair proteins locate damaged bases in the genome?
1 reference
stated in
COCI
retrieved
11 October 2022
reference URL
https://opencitations.net/index/coci/api/v1/references/10.1146/ANNUREV.BIOCHEM.67.1.181
The DNA (cytosine-5) methyltransferases
1 reference
stated in
COCI
retrieved
11 October 2022
reference URL
https://opencitations.net/index/coci/api/v1/references/10.1146/ANNUREV.BIOCHEM.67.1.181
Structure and function of the multifunctional DNA-repair enzyme exonuclease III
1 reference
stated in
COCI
retrieved
11 October 2022
reference URL
https://opencitations.net/index/coci/api/v1/references/10.1146/ANNUREV.BIOCHEM.67.1.181
Dynamics of mismatched base pairs in DNA.
1 reference
stated in
COCI
retrieved
11 October 2022
reference URL
https://opencitations.net/index/coci/api/v1/references/10.1146/ANNUREV.BIOCHEM.67.1.181
Crystal structure of an ATP-dependent DNA ligase from bacteriophage T7
1 reference
stated in
COCI
retrieved
11 October 2022
reference URL
https://opencitations.net/index/coci/api/v1/references/10.1146/ANNUREV.BIOCHEM.67.1.181
Refinement of Eco RI endonuclease crystal structure: a revised protein chain tracing
1 reference
stated in
COCI
retrieved
11 October 2022
reference URL
https://opencitations.net/index/coci/api/v1/references/10.1146/ANNUREV.BIOCHEM.67.1.181
Novel DNA binding motifs in the DNA repair enzyme endonuclease III crystal structure
1 reference
stated in
COCI
retrieved
11 October 2022
reference URL
https://opencitations.net/index/coci/api/v1/references/10.1146/ANNUREV.BIOCHEM.67.1.181
Structural determinants for specific recognition by T4 endonuclease V
1 reference
stated in
COCI
retrieved
11 October 2022
reference URL
https://opencitations.net/index/coci/api/v1/references/10.1146/ANNUREV.BIOCHEM.67.1.181
DNA glycosylases
1 reference
stated in
COCI
retrieved
11 October 2022
reference URL
https://opencitations.net/index/coci/api/v1/references/10.1146/ANNUREV.BIOCHEM.67.1.181
Crystal structure of the HhaI DNA methyltransferase
1 reference
stated in
COCI
retrieved
11 October 2022
reference URL
https://opencitations.net/index/coci/api/v1/references/10.1146/ANNUREV.BIOCHEM.67.1.181
Crystal structure of the HhaI DNA methyltransferase complexed with S-adenosyl-L-methionine
1 reference
stated in
COCI
retrieved
11 October 2022
reference URL
https://opencitations.net/index/coci/api/v1/references/10.1146/ANNUREV.BIOCHEM.67.1.181
Structure and function of DNA photolyase
1 reference
stated in
COCI
retrieved
11 October 2022
reference URL
https://opencitations.net/index/coci/api/v1/references/10.1146/ANNUREV.BIOCHEM.67.1.181
A nucleotide-flipping mechanism from the structure of human uracil-DNA glycosylase bound to DNA
1 reference
stated in
COCI
retrieved
11 October 2022
reference URL
https://opencitations.net/index/coci/api/v1/references/10.1146/ANNUREV.BIOCHEM.67.1.181
Identifiers
DOI
10.1146/ANNUREV.BIOCHEM.67.1.181
1 reference
stated in
Europe PubMed Central
PubMed publication ID
9759487
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:9759487%20AND%20SRC:MED&resulttype=core&format=json
retrieved
5 December 2019
PubMed publication ID
9759487
1 reference
stated in
Europe PubMed Central
PubMed publication ID
9759487
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:9759487%20AND%20SRC:MED&resulttype=core&format=json
retrieved
5 December 2019
ResearchGate publication ID
13525539
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