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A hybrid approach for predicting promiscuous MHC class I restricted T cell epitopes.
scientific article published in January 2007
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1 reference
stated in
Europe PubMed Central
PubMed publication ID
17426378
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17426378%20AND%20SRC:MED&resulttype=core&format=json
retrieved
29 December 2019
title
A hybrid approach for predicting promiscuous MHC class I restricted T cell epitopes
(English)
1 reference
stated in
Europe PubMed Central
PubMed publication ID
17426378
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17426378%20AND%20SRC:MED&resulttype=core&format=json
retrieved
29 December 2019
author
Manoj Bhasin
series ordinal
1
1 reference
stated in
Europe PubMed Central
PubMed publication ID
17426378
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17426378%20AND%20SRC:MED&resulttype=core&format=json
retrieved
29 December 2019
G. P. S. Raghava
series ordinal
2
1 reference
stated in
Europe PubMed Central
PubMed publication ID
17426378
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17426378%20AND%20SRC:MED&resulttype=core&format=json
retrieved
29 December 2019
author name string
Manoj Bhasin
series ordinal
1
1 reference
stated in
Europe PubMed Central
PubMed publication ID
17426378
retrieved
17 April 2018
reference URL
http://europepmc.org/abstract/MED/17426378
G P S Raghava
series ordinal
2
1 reference
stated in
Europe PubMed Central
PubMed publication ID
17426378
retrieved
17 April 2018
reference URL
http://europepmc.org/abstract/MED/17426378
publication date
1 January 2007
1 reference
stated in
Europe PubMed Central
PubMed publication ID
17426378
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17426378%20AND%20SRC:MED&resulttype=core&format=json
retrieved
29 December 2019
published in
Journal of Biosciences
1 reference
stated in
Europe PubMed Central
PubMed publication ID
17426378
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17426378%20AND%20SRC:MED&resulttype=core&format=json
retrieved
29 December 2019
volume
32
1 reference
stated in
Europe PubMed Central
PubMed publication ID
17426378
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17426378%20AND%20SRC:MED&resulttype=core&format=json
retrieved
29 December 2019
issue
1
1 reference
stated in
Europe PubMed Central
PubMed publication ID
17426378
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17426378%20AND%20SRC:MED&resulttype=core&format=json
retrieved
29 December 2019
page(s)
31-42
1 reference
stated in
Europe PubMed Central
PubMed publication ID
17426378
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17426378%20AND%20SRC:MED&resulttype=core&format=json
retrieved
29 December 2019
cites work
MHCBN: a comprehensive database of MHC binding and non-binding peptides
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/17426378
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Prediction of MHC class I binding peptides, using SVMHC
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/17426378
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
SYFPEITHI: database for MHC ligands and peptide motifs
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/17426378
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
ProPred: prediction of HLA-DR binding sites.
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/17426378
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Discrete cleavage motifs of constitutive and immunoproteasomes revealed by quantitative analysis of cleavage products
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/17426378
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Structure-based prediction of binding peptides to MHC class I molecules: application to a broad range of MHC alleles
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/17426378
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Recognition of mycobacterial epitopes by T cells across mammalian species and use of a program that predicts human HLA-DR binding peptides to predict bovine epitopes
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/17426378
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Promiscuous and allele-specific anchors in HLA-DR-binding peptides
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/17426378
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
The importance of the proteasome and subsequent proteolytic steps in the generation of antigenic peptides.
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/17426378
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Neural network-based prediction of candidate T-cell epitopes.
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/17426378
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Support vector machine approach for protein subcellular localization prediction
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/17426378
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
The SWISS-PROT protein sequence database and its supplement TrEMBL in 2000.
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/17426378
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
ProPred1: prediction of promiscuous MHC Class-I binding sites.
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/17426378
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Prediction of protein subcellular locations using Markov chain models
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/17426378
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Scheme for ranking potential HLA-A2 binding peptides based on independent binding of individual peptide side-chains.
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/17426378
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Toward the Quantitative Prediction of T-Cell Epitopes: CoMFA and CoMSIA Studies of Peptides with Affinity for the Class I MHC Molecule HLA-A*0201
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/17426378
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Prediction of MHC class I binding peptides using profile motifs.
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/17426378
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Efficient identification of novel HLA-A(*)0201-presented cytotoxic T lymphocyte epitopes in the widely expressed tumor antigen PRAME by proteasome-mediated digestion analysis.
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/17426378
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Prediction of the subcellular location of prokaryotic proteins based on the hydrophobicity index of amino acids.
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/17426378
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Generation of tissue-specific and promiscuous HLA ligand databases using DNA microarrays and virtual HLA class II matrices
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/17426378
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Prediction of binding to MHC class I molecules.
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/17426378
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Two complementary methods for predicting peptides binding major histocompatibility complex molecules.
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/17426378
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
The nature of the MHC class I peptide loading complex
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/17426378
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Prediction of the subcellular location of prokaryotic proteins based on a new representation of the amino acid composition.
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/17426378
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Proteasome-assisted identification of a SSX-2-derived epitope recognized by tumor-reactive CTL infiltrating metastatic melanoma
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/17426378
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Description and prediction of peptide-MHC binding: the 'human MHC project'.
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/17426378
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Identifiers
DOI
10.1007/S12038-007-0004-5
1 reference
stated in
Europe PubMed Central
PubMed publication ID
17426378
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17426378%20AND%20SRC:MED&resulttype=core&format=json
retrieved
29 December 2019
PubMed publication ID
17426378
1 reference
stated in
Europe PubMed Central
PubMed publication ID
17426378
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17426378%20AND%20SRC:MED&resulttype=core&format=json
retrieved
29 December 2019
ResearchGate publication ID
51390528
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