(Q48430257)

11 February 2018

http://europepmc.org/abstract/MED/17000751

title

GATHER: a systems approach to interpreting genomic signatures (English)

1 reference

11 February 2018

http://europepmc.org/abstract/MED/17000751

author name string

Jeffrey T Chang

series ordinal

1

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11 February 2018

http://europepmc.org/abstract/MED/17000751

Joseph R Nevins

series ordinal

2

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11 February 2018

http://europepmc.org/abstract/MED/17000751

language of work or name

English

0 references

publication date

25 September 2006

1 reference

11 February 2018

http://europepmc.org/abstract/MED/17000751

number of pages

8

1 reference

based on heuristic

inferred from page(s)

published in

Bioinformatics

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11 February 2018

http://europepmc.org/abstract/MED/17000751

volume

22

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11 February 2018

http://europepmc.org/abstract/MED/17000751

issue

23

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11 February 2018

http://europepmc.org/abstract/MED/17000751

page(s)

2926-2933

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11 February 2018

http://europepmc.org/abstract/MED/17000751

cites work

FatiGO: a web tool for finding significant associations of Gene Ontology terms with groups of genes

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTL483

Microarray data analysis: from disarray to consolidation and consensus

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTL483

Basic local alignment search tool

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTL483

The E2F family: specific functions and overlapping interests

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTL483

The SWISS-PROT protein sequence data bank

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTL483

NCBI GEO: mining millions of expression profiles--database and tools

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTL483

Oncogenic pathway signatures in human cancers as a guide to targeted therapies

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTL483

Transcriptional regulation of AKT activation by E2F.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTL483

Cellular targets for activation by the E2F1 transcription factor include DNA synthesis- and G1/S-regulatory genes

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTL483

The E2F transcriptional network: old acquaintances with new faces

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTL483

Outcome signature genes in breast cancer: is there a unique set?

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTL483

Identification of E-box factor TFE3 as a functional partner for the E2F3 transcription factor

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTL483

Molecular classification of cancer: class discovery and class prediction by gene expression monitoring

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTL483

Specificity in the activation and control of transcription factor E2F-dependent apoptosis

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTL483

Regulation of cell proliferation by the E2F transcription factors

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTL483

A gene network for navigating the literature

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTL483

Role for E2F in control of both DNA replication and mitotic functions as revealed from DNA microarray analysis

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTL483

A literature network of human genes for high-throughput analysis of gene expression

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTL483

Interaction of Sp1 with the growth- and cell cycle-regulated transcription factor E2F

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTL483

The meaning of systems biology

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTL483

E2F3 activity is regulated during the cell cycle and is required for the induction of S phase.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTL483

Deciphering transcriptional regulatory elements that encode specific cell cycle phasing by comparative genomics analysis.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTL483

Regulation of E2F1 by BRCT Domain-Containing Protein TopBP1

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTL483

PGC-1alpha-responsive genes involved in oxidative phosphorylation are coordinately downregulated in human diabetes

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTL483

Apaf-1 is a transcriptional target for E2F and p53

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTL483

E2Fs regulate the expression of genes involved in differentiation, development, proliferation, and apoptosis.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTL483

SCOP: a structural classification of proteins database for the investigation of sequences and structures

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTL483

Coordination of growth and cell division in the Drosophila wing

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTL483

Expression of the HsOrc1 gene, a human ORC1 homolog, is regulated by cell proliferation via the E2F transcription factor

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTL483

Use of proteomic patterns in serum to identify ovarian cancer

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTL483

E2Fs up-regulate expression of genes involved in DNA replication, DNA repair and mitosis

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTL483

E2F integrates cell cycle progression with DNA repair, replication, and G(2)/M checkpoints

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTL483

Mining for regulatory programs in the cancer transcriptome

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTL483

Towards a proteome-scale map of the human protein–protein interaction network

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTL483

Interaction of YY1 with E2Fs, mediated by RYBP, provides a mechanism for specificity of E2F function

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTL483

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTL483

A human protein-protein interaction network: a resource for annotating the proteome

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTL483

Gene set enrichment analysis: a knowledge-based approach for interpreting genome-wide expression profiles

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTL483

Gene expression profiling predicts clinical outcome of breast cancer

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTL483

Mechanisms of transcriptional regulation by Rb-E2F segregate by biological pathway

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTL483

GoMiner: a resource for biological interpretation of genomic and proteomic data

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTL483

WebGestalt: an integrated system for exploring gene sets in various biological contexts

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTL483

E2Fs link the control of G1/S and G2/M transcription

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTL483

10.1093/BIOINFORMATICS/BTL483

21 January 2018

Identifiers

DOI

1 reference

11 February 2018

http://europepmc.org/abstract/MED/17000751

DBLP publication ID

journals/bioinformatics/ChangN06

1 reference

DBLP Dataset 2021-01-02

28 January 2021

1 reference

11 February 2018