(Q46203046)

20 December 2017

http://europepmc.org/abstract/MED/16271890

title

Structural basis of severe acute respiratory syndrome coronavirus ADP-ribose-1''-phosphate dephosphorylation by a conserved domain of nsP3. (English)

1 reference

20 December 2017

http://europepmc.org/abstract/MED/16271890

main subject

SARS-CoV-1

1 reference

based on heuristic

inferred from abstract

1 reference

inferred from abstract

papain-like proteinase [SARS-Cov]

0 references

1 reference

8

1 reference

20 December 2017

http://europepmc.org/abstract/MED/16271890

author name string

Kumar Singh Saikatendu

1

1 reference

20 December 2017

http://europepmc.org/abstract/MED/16271890

Jeremiah S Joseph

2

1 reference

20 December 2017

http://europepmc.org/abstract/MED/16271890

Vanitha Subramanian

3

1 reference

20 December 2017

http://europepmc.org/abstract/MED/16271890

Tom Clayton

4

1 reference

20 December 2017

http://europepmc.org/abstract/MED/16271890

Mark Griffith

5

1 reference

20 December 2017

http://europepmc.org/abstract/MED/16271890

Kin Moy

6

1 reference

20 December 2017

http://europepmc.org/abstract/MED/16271890

Jeffrey Velasquez

7

1 reference

20 December 2017

http://europepmc.org/abstract/MED/16271890

Michael J Buchmeier

9

1 reference

20 December 2017

http://europepmc.org/abstract/MED/16271890

Raymond C Stevens

10

1 reference

20 December 2017

http://europepmc.org/abstract/MED/16271890

Peter Kuhn

11

1 reference

20 December 2017

http://europepmc.org/abstract/MED/16271890

language of work or name

English

0 references

publication date

1 November 2005

1 reference

20 December 2017

http://europepmc.org/abstract/MED/16271890

published in

Structure

1 reference

20 December 2017

http://europepmc.org/abstract/MED/16271890

volume

13

1 reference

20 December 2017

http://europepmc.org/abstract/MED/16271890

issue

11

1 reference

20 December 2017

http://europepmc.org/abstract/MED/16271890

page(s)

1665-1675

1 reference

20 December 2017

http://europepmc.org/abstract/MED/16271890

cites work

The crystal structure of AF1521 a protein from Archaeoglobus fulgidus with homology to the non-histone domain of macroH2A

1 reference

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7126892

Gapped BLAST and PSI-BLAST: a new generation of protein database search programs

12 September 2020

1 reference

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7126892

Mayaro virus: a new human disease agent. II. Isolation from blood of patients in Trinidad, B.W.I.

12 September 2020

1 reference

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7126892

Effect of methyltransferase inhibitors on the regulation of baculovirus protein synthesis

12 September 2020

1 reference

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7126892

Programmed ribosomal frameshifting in decoding the SARS-CoV genome

12 September 2020

1 reference

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7126892

The severe acute respiratory syndrome coronavirus Nsp15 protein is an endoribonuclease that prefers manganese as a cofactor

12 September 2020

1 reference

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7126892

Molecular structure of leucine aminopeptidase at 2.7-A resolution

12 September 2020

1 reference

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7126892

The CCP4 suite: programs for protein crystallography

12 September 2020

1 reference

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7126892

carP, involved in pyrimidine regulation of the Escherichia coli carbamoylphosphate synthetase operon encodes a sequence-specific DNA-binding protein identical to XerB and PepA, also required for resolution of ColEI multimers

12 September 2020

1 reference

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7126892

An NAD derivative produced during transfer RNA splicing: ADP-ribose 1"-2" cyclic phosphate

12 September 2020

1 reference

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7126892

tRNA splicing in yeast and wheat germ. A cyclic phosphodiesterase implicated in the metabolism of ADP-ribose 1",2"-cyclic phosphate.

12 September 2020

1 reference

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7126892

Poly(ADP-ribosyl)ation reactions in the regulation of nuclear functions

12 September 2020

1 reference

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7126892

Identification of a novel coronavirus in patients with severe acute respiratory syndrome

12 September 2020

1 reference

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7126892

12 September 2020

1 reference

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7126892

Cyclophilin residues that affect noncompetitive inhibition of the protein serine phosphatase activity of calcineurin by the cyclophilin.cyclosporin A complex

12 September 2020

1 reference

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7126892

Functional characterization of XendoU, the endoribonuclease involved in small nucleolar RNA biosynthesis

12 September 2020

1 reference

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7126892

Severe acute respiratory syndrome: global initiatives for disease diagnosis.

12 September 2020

1 reference

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7126892

Protein structure comparison by alignment of distance matrices

12 September 2020

1 reference

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7126892

Major genetic marker of nidoviruses encodes a replicative endoribonuclease

12 September 2020

1 reference

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7126892

CD209L (L-SIGN) is a receptor for severe acute respiratory syndrome coronavirus

12 September 2020

1 reference

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7126892

Improved methods for building protein models in electron density maps and the location of errors in these models

12 September 2020

1 reference

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7126892

A novel coronavirus associated with severe acute respiratory syndrome

12 September 2020

1 reference

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7126892

Angiotensin-converting enzyme 2: a functional receptor for SARS coronavirus

12 September 2020

1 reference

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7126892

Structure and mechanism of ADP-ribose-1''-monophosphatase (Appr-1''-pase), a ubiquitous cellular processing enzyme

12 September 2020

1 reference

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7126892

Automated refinement for protein crystallography

12 September 2020

1 reference

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7126892

Emergence of epidemic O'nyong-nyong fever in Uganda after a 35-year absence: genetic characterization of the virus

12 September 2020

1 reference

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7126892

Structural genomics of the Thermotoga maritima proteome implemented in a high-throughput structure determination pipeline

12 September 2020

1 reference

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7126892

SMART 4.0: towards genomic data integration

12 September 2020

1 reference

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7126892

Angiotensin-converting enzyme 2 is a functional receptor for the SARS coronavirus

12 September 2020

1 reference

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7126892

A biochemical genomics approach for identifying genes by the activity of their products.

12 September 2020

1 reference

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7126892

A highly specific phosphatase from Saccharomyces cerevisiae implicated in tRNA splicing

12 September 2020

1 reference

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7126892

Peptidase activity of Escherichia coli aminopeptidase A is not required for its role in Xer site-specific recombination.

12 September 2020

1 reference

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7126892

Blu-Ice and the Distributed Control System: software for data acquisition and instrument control at macromolecular crystallography beamlines

12 September 2020

1 reference

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7126892

The InterPro database, 2003 brings increased coverage and new features

12 September 2020

1 reference

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7126892

Refinement of macromolecular structures by the maximum-likelihood method

12 September 2020

1 reference

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7126892

SCOP: a structural classification of proteins database for the investigation of sequences and structures

12 September 2020

1 reference

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7126892

Processing of X-ray diffraction data collected in oscillation mode

12 September 2020

1 reference

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7126892

Sequence requirements for RNA strand transfer during nidovirus discontinuous subgenomic RNA synthesis.

12 September 2020

1 reference

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7126892

Precise excision of intervening sequences from precursor tRNAs by a membrane-associated yeast endonuclease

12 September 2020

1 reference

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7126892

MacroH2A, a core histone containing a large nonhistone region

12 September 2020

1 reference

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7126892

Evolutionary conservation of histone macroH2A subtypes and domains

12 September 2020

1 reference

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7126892

Coronavirus as a possible cause of severe acute respiratory syndrome

12 September 2020

1 reference

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7126892

Pre-tRNA splicing: variation on a theme or exception to the rule?

12 September 2020

1 reference

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7126892

Comparison of sequence profiles. Strategies for structural predictions using sequence information

12 September 2020

1 reference

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7126892

Genome structure of Sagiyama virus and its relatedness to other alphaviruses

12 September 2020

1 reference

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7126892

A highly specific phosphatase that acts on ADP-ribose 1''-phosphate, a metabolite of tRNA splicing in Saccharomyces cerevisiae

12 September 2020

1 reference

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7126892

Unique and conserved features of genome and proteome of SARS-coronavirus, an early split-off from the coronavirus group 2 lineage

12 September 2020

1 reference

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7126892

Two-metal ion mechanism of bovine lens leucine aminopeptidase: active site solvent structure and binding mode of L-leucinal, a gem-diolate transition state analogue, by X-ray crystallography

12 September 2020

1 reference

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7126892

X-ray structure of aminopeptidase A from Escherichia coli and a model for the nucleoprotein complex in Xer site-specific recombination

12 September 2020

1 reference

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7126892

Complete nucleotide sequence of the genomic RNA of Sindbis virus

12 September 2020

1 reference

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7126892

Statistical density modification using local pattern matching

12 September 2020

1 reference

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7126892

Automated MAD and MIR structure solution

12 September 2020

1 reference

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7126892

Mechanisms and enzymes involved in SARS coronavirus genome expression

12 September 2020

1 reference

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7126892

Replicase complex genes of Semliki Forest virus confer lethal neurovirulence

12 September 2020

1 reference

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7126892

Role of the alfalfa mosaic virus methyltransferase-like domain in negative-strand RNA synthesis

12 September 2020

1 reference

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7126892

mRNA cap-1 methyltransferase in the SARS genome.

12 September 2020

1 reference

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7126892

12 September 2020

1 reference

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7126892

A continuous spectrophotometric assay for phosphorylase kinase

12 September 2020

1 reference

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7126892

A continuous spectrophotometric assay for inorganic phosphate and for measuring phosphate release kinetics in biological systems

12 September 2020

1 reference

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7126892

Characterization of genotype II Rubella virus strains

12 September 2020

1 reference

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7126892

The autocatalytic release of a putative RNA virus transcription factor from its polyprotein precursor involves two paralogous papain-like proteases that cleave the same peptide bond.

12 September 2020

1 reference

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7126892

10.1016/J.STR.2005.07.022

12 September 2020

Identifiers

DOI

1 reference

20 December 2017

http://europepmc.org/abstract/MED/16271890

PMC publication ID

7126892

0 references

1 reference

20 December 2017