(Q40125902)

17 September 2017

Systematic evaluation of variability in ChIP-chip experiments using predefined DNA targets (English)

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17 September 2017

9

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17 September 2017

10

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17 September 2017

12

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15

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18

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17 September 2017

33

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17 September 2017

Jun S Song

23

0 references

Mark Bender Gerstein

37

object named as

Mark Gerstein

1 reference

17 September 2017

38

Michael Snyder

1 reference

17 September 2017

2

Wei Li

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17 September 2017

47

Jason D Lieb

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17 September 2017

David S Johnson

1

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17 September 2017

D Benjamin Gordon

3

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17 September 2017

Arindam Bhattacharjee

4

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17 September 2017

Bo Curry

5

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17 September 2017

Jayati Ghosh

6

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17 September 2017

Leonardo Brizuela

7

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17 September 2017

Jason S Carroll

8

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17 September 2017

Christoph M Koch

11

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17 September 2017

Mark Bieda

13

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17 September 2017

Xiaoqin Xu

14

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17 September 2017

Philipp Kapranov

16

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17 September 2017

David A Nix

17

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17 September 2017

Xinmin Zhang

19

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17 September 2017

Heather Holster

20

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17 September 2017

Nan Jiang

21

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17 September 2017

Roland D Green

22

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17 September 2017

Scott A McCuine

24

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17 September 2017

Elizabeth Anton

25

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17 September 2017

Loan Nguyen

26

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17 September 2017

Nathan D Trinklein

27

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17 September 2017

Zhen Ye

28

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17 September 2017

Keith Ching

29

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17 September 2017

David Hawkins

30

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17 September 2017

Bing Ren

31

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17 September 2017

Peter C Scacheri

32

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17 September 2017

Alexander Karpikov

34

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17 September 2017

Ghia Euskirchen

35

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17 September 2017

Sherman Weissman

36

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17 September 2017

Annie Yang

39

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17 September 2017

Zarmik Moqtaderi

40

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17 September 2017

Heather Hirsch

41

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17 September 2017

Hennady P Shulha

42

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17 September 2017

Yutao Fu

43

1 reference

17 September 2017

Zhiping Weng

44

1 reference

17 September 2017

Kevin Struhl

45

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17 September 2017

Richard M Myers

46

1 reference

17 September 2017

X Shirley Liu

48

1 reference

17 September 2017

7 February 2008

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17 September 2017

11

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based on heuristic

inferred from page(s)

published in

Genome Research

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17 September 2017

18

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17 September 2017

3

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17 September 2017

393-403

1 reference

Model-based analysis of two-color arrays (MA2C).

17 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2259103

High-throughput mapping of origins of replication in human cells

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2259103

Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2259103

Mapping of transcription factor binding regions in mammalian cells by ChIP: comparison of array- and sequencing-based technologies

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2259103

Genome-wide analysis of KAP1 binding suggests autoregulation of KRAB-ZNFs

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2259103

Genome-wide mapping of in vivo protein-DNA interactions

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2259103

Tilescope: online analysis pipeline for high-density tiling microarray data

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2259103

Assessing the need for sequence-based normalization in tiling microarray experiments

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2259103

High-throughput methods of regulatory element discovery

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2259103

Relationships between p63 binding, DNA sequence, transcription activity, and biological function in human cells

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2259103

Comparison of sample preparation methods for ChIP-chip assays

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2259103

Genome-wide analysis of estrogen receptor binding sites

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2259103

The MicroArray Quality Control (MAQC) project shows inter- and intraplatform reproducibility of gene expression measurements

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2259103

Statistics for ChIP-chip and DNase hypersensitivity experiments on NimbleGen arrays

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2259103

Model-based analysis of tiling-arrays for ChIP-chip.

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2259103

Hybridization interactions between probesets in short oligo microarrays lead to spurious correlations

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2259103

Genome-wide analysis of protein-DNA interactions

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2259103

Control of developmental regulators by Polycomb in human embryonic stem cells

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2259103

Unbiased location analysis of E2F1-binding sites suggests a widespread role for E2F1 in the human genome

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2259103

Comprehensive analysis of transcriptional promoter structure and function in 1% of the human genome

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2259103

A high-resolution map of active promoters in the human genome

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2259103

Preferred analysis methods for Affymetrix GeneChips revealed by a wholly defined control dataset

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2259103

Progress and challenges in profiling the dynamics of chromatin and transcription factor binding with DNA microarrays.

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2259103

Unbiased mapping of transcription factor binding sites along human chromosomes 21 and 22 points to widespread regulation of noncoding RNAs

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2259103

Development and validation of a T7 based linear amplification for genomic DNA

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2259103

BLAT—The BLAST-Like Alignment Tool

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2259103

Segmental duplications: organization and impact within the current human genome project assembly

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2259103

Expression profiling using microarrays fabricated by an ink-jet oligonucleotide synthesizer

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2259103

Repbase update: a database and an electronic journal of repetitive elements

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2259103

Tandem repeats finder: a program to analyze DNA sequences

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2259103

Multiple-laboratory comparison of microarray platforms

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2259103

Performance comparison of one-color and two-color platforms within the MicroArray Quality Control (MAQC) project

2 December 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/18258921

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1101/GR.7080508

1 reference

release_lndlgqd7pjc3bfwtcyrct474ty

17 September 2017

1 reference

Fatcat

https://api.fatcat.wiki/v0/release/lndlgqd7pjc3bfwtcyrct474ty

mapped directly with Wikidata item

24 November 2022

based on heuristic

1 reference

17 September 2017

PubMed publication ID

18258921

1 reference