(Q38318473)

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Design and synthesis of RNA miniduplexes via a synthetic linker approach. 2. Generation of covalently closed, double-stranded cyclic HIV-1 TAR RNA analogs with high Tat-binding affinity

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Europe PubMed Central

PMC publication ID

2 September 2017

Design and synthesis of RNA miniduplexes via a synthetic linker approach. 2. Generation of covalently closed, double-stranded cyclic HIV-1 TAR RNA analogs with high Tat-binding affinity (English)

1 reference

Europe PubMed Central

PMC publication ID

2 September 2017

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author name string

X Ma MY

1

1 reference

Europe PubMed Central

PMC publication ID

2 September 2017

McCallum K

2

1 reference

Europe PubMed Central

PMC publication ID

2 September 2017

Climie SC

3

1 reference

Europe PubMed Central

PMC publication ID

2 September 2017

Kuperman R

4

1 reference

Europe PubMed Central

PMC publication ID

2 September 2017

Lin WC

5

1 reference

Europe PubMed Central

PMC publication ID

2 September 2017

Sumner-Smith M

6

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Europe PubMed Central

PMC publication ID

2 September 2017

Barnett RW

7

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Europe PubMed Central

PMC publication ID

2 September 2017

language of work or name

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publication date

1 June 1993

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Europe PubMed Central

PMC publication ID

2 September 2017

number of pages

5

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Nucleic Acids Research

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Europe PubMed Central

PMC publication ID

2 September 2017

21

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Europe PubMed Central

PMC publication ID

2 September 2017

11

1 reference

Europe PubMed Central

PMC publication ID

2 September 2017

2585-2589

1 reference

Europe PubMed Central

PMC publication ID

2 September 2017

Hydrogen-bonding contacts in the major groove are required for human immunodeficiency virus type-1 tat protein recognition of TAR RNA.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=309585

6 September 2017

Design and synthesis of RNA miniduplexes via a synthetic linker approach

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=309585

6 September 2017

Purification and properties of bacteriophage T4-induced RNA ligase

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=309585

6 September 2017

Circular dichroism studies of an oligodeoxyribonucleotide containing a hairpin loop made of a hexaethylene glycol chain: conformation and stability

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=309585

6 September 2017

Regulation of gene expression with double-stranded phosphorothioate oligonucleotides

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=309585

6 September 2017

The number of positively charged amino acids in the basic domain of Tat is critical for trans-activation and complex formation with TAR RNA

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=309585

6 September 2017

Critical chemical features in trans-acting-responsive RNA are required for interaction with human immunodeficiency virus type 1 Tat protein

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=309585

6 September 2017

The anti-gene strategy: control of gene expression by triplex-forming-oligonucleotides

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=309585

6 September 2017

Control of human immunodeficiency virus replication by the tat, rev, nef and protease genes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=309585

6 September 2017

Unusual structure of the human immunodeficiency virus type 1 trans-activation response element

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=309585

6 September 2017

Conserved nucleotides in the TAR RNA stem of human immunodeficiency virus type 1 are critical for Tat binding and trans activation: model for TAR RNA tertiary structure

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=309585

6 September 2017

Transcription factors: structural families and principles of DNA recognition

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=309585

6 September 2017

The stability of different forms of double-stranded decoy DNA in serum and nuclear extracts

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=309585

6 September 2017

New insights into the mechanism of HIV-1 trans-activation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=309585

6 September 2017

DNA curving and bending in protein-DNA recognition

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=309585

6 September 2017

Peptide models of the tat—Tar protein‐RNA interaction

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=309585

6 September 2017

3'-terminal labelling of RNA with T4 RNA ligase

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=309585

6 September 2017

Synthesis of cyclic oligodeoxyribonucleotides via the 'filtration' approach

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=309585

14 September 2017

DNA hairpin loops in solution. Correlation between primary structure, thermostability and reactivity with single-strand-specific nuclease from mung bean

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=309585

14 September 2017

The solution structure of a DNA hairpin containing a loop of three thymidines determined by nuclear magnetic resonance and molecular mechanics

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=309585

14 September 2017

A dumbbell-shaped, double-hairpin structure of DNA: a thermodynamic investigation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=309585

23 June 2018

Fragments of the HIV-1 Tat protein specifically bind TAR RNA.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=309585

23 June 2018

Solution structure of an unusually stable RNA hairpin, 5GGAC(UUCG)GUCC

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=309585

23 June 2018

Triple-helix formation by an oligonucleotide containing one (dA)12 and two (dT)12 sequences bridged by two hexaethylene glycol chains

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=309585

23 June 2018

High affinity binding of TAR RNA by the human immunodeficiency virus type-1 tat protein requires base-pairs in the RNA stem and amino acid residues flanking the basic region

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=309585

31 August 2018

Melting behavior of a covalently closed, single-stranded, circular DNA

1 reference

https://pubmed.ncbi.nlm.nih.gov/8332456

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Chemical synthesis of oligodeoxynucleotide dumbbells

1 reference

https://pubmed.ncbi.nlm.nih.gov/8332456

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Therapeutic Applications of Oligonucleotides

1 reference

https://pubmed.ncbi.nlm.nih.gov/8332456

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Conformation of the TAR RNA-Arginine Complex by NMR Spectroscopy

1 reference

https://pubmed.ncbi.nlm.nih.gov/8332456

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Circular dichroism studies suggest that TAR RNA changes conformation upon specific binding of arginine or guanidine

1 reference

https://pubmed.ncbi.nlm.nih.gov/8332456

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1093/NAR/21.11.2585

1 reference

Europe PubMed Central

PMC publication ID

2 September 2017

release_trxz7ejw4bgotb7dz64gazlcua

1 reference

https://api.fatcat.wiki/v0/release/trxz7ejw4bgotb7dz64gazlcua

24 November 2022

based on heuristic

mapped directly with Wikidata item

PMC publication ID

1 reference

Europe PubMed Central

PMC publication ID

2 September 2017

PubMed publication ID

1 reference

Europe PubMed Central

PMC publication ID

2 September 2017

ResearchGate publication ID

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