(Q37322323)

19 August 2017

Characterization of evolutionary rates and constraints in three Mammalian genomes (English)

1 reference

19 August 2017

2

Michael Brudno

1 reference

19 August 2017

5

Serafim Batzoglou

1 reference

19 August 2017

4

Inna Dubchak

1 reference

19 August 2017

6

Arend Sidow

1 reference

19 August 2017

3

Eric A Stone

1 reference

19 August 2017

Gregory M Cooper

1

1 reference

19 August 2017

1 April 2004

1 reference

19 August 2017

1 reference

19 August 2017

14

1 reference

19 August 2017

4

1 reference

19 August 2017

539-548

1 reference

Automated whole-genome multiple alignment of rat, mouse, and human

19 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=383297

Genome sequence of the Brown Norway rat yields insights into mammalian evolution

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=383297

Genomic regulatory regions: insights from comparative sequence analysis

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=383297

Comparative analyses of multi-species sequences from targeted genomic regions

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=383297

Quantitative Estimates of Sequence Divergence for Comparative Analyses of Mammalian Genomes

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=383297

LAGAN and Multi-LAGAN: efficient tools for large-scale multiple alignment of genomic DNA

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=383297

Phylogenetic shadowing of primate sequences to find functional regions of the human genome

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=383297

Strategies and tools for whole-genome alignments

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=383297

Covariation in frequencies of substitution, deletion, transposition, and recombination during eutherian evolution

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=383297

Initial sequencing and comparative analysis of the mouse genome

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=383297

Sequence first. Ask questions later

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=383297

Mutational equilibrium model of genome size evolution

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=383297

Transcriptional regulation of the stem cell leukemia gene (SCL)--comparative analysis of five vertebrate SCL loci

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=383297

Selective constraint in intergenic regions of human and mouse genomes.

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=383297

Conserved noncoding sequences are reliable guides to regulatory elements.

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=383297

Evidence for DNA Loss as a Determinant of Genome Size

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=383297

PAML: a program package for phylogenetic analysis by maximum likelihood

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=383297

Evolutionary trees from DNA sequences: A maximum likelihood approach

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=383297

The expected equilibrium of the CpG dinucleotide in vertebrate genomes under a mutation model

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=383297

Models of sequence evolution for DNA sequences containing gaps

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=383297

Phylogenetic estimation of context-dependent substitution rates by maximum likelihood

26 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=383297

High Intron Sequence Conservation Across Three Mammalian Orders Suggests Functional Constraints

2 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=383297

Human and mouse ABCA1 comparative sequencing and transgenesis studies revealing novel regulatory sequences

2 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=383297

An efficient cis-element discovery method using multiple sequence comparisons based on evolutionary relationships.

2 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=383297

Numerous potentially functional but non-genic conserved sequences on human chromosome 21

2 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=383297

Nonrandomness of point mutation as reflected in nucleotide substitutions in pseudogenes and its evolutionary implications

3 December 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/15059994

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Estimating the pattern of nucleotide substitution

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/15059994

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1101/GR.2034704

1 reference

19 August 2017

1 reference

PMC publication ID

383297

19 August 2017

PubMed publication ID

15059994

1 reference

PMC publication ID

383297