(Q37028776)

17 August 2017

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title

Coupling and coordination in gene expression processes: a systems biology view (English)

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17 August 2017

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2

Pamela A Silver

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17 August 2017

Suzanne Komili

1

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17 August 2017

publication date

1 January 2008

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17 August 2017

published in

Nature Reviews Genetics

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17 August 2017

volume

9

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17 August 2017

issue

1

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17 August 2017

page(s)

38-48

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An extensive network of coupling among gene expression machines

17 August 2017

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A computational analysis of whole-genome expression data reveals chromosomal domains of gene expression

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Transcript specificity in yeast pre-mRNA splicing revealed by mutations in core spliceosomal components

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Rapid, transcript-specific changes in splicing in response to environmental stress

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Genomic mapping of RNA polymerase II reveals sites of co-transcriptional regulation in human cells

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31 March 2020

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Genome-wide mRNA surveillance is coupled to mRNA export

31 March 2020

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31 March 2020

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31 March 2020

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31 March 2020

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A novel role for shuttling SR proteins in mRNA translation

31 March 2020

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The 19S regulatory particle of the proteasome is required for efficient transcription elongation by RNA polymerase II.

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31 March 2020

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Diverse roles for ubiquitin-dependent proteolysis in transcriptional activation

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Cks1-dependent proteasome recruitment and activation of CDC20 transcription in budding yeast

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Cyclic, proteasome-mediated turnover of unliganded and liganded ERalpha on responsive promoters is an integral feature of estrogen signaling

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The role of the proteasomal ATPases and activator monoubiquitylation in regulating Gal4 binding to promoters

31 March 2020

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Genomic association of the proteasome demonstrates overlapping gene regulatory activity with transcription factor substrates.

31 March 2020

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Widespread, but non-identical, association of proteasomal 19 and 20 S proteins with yeast chromatin.

31 March 2020

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Proteasome inhibition alters the transcription of multiple yeast genes

31 March 2020

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Cic1p/Nsa3p is required for synthesis and nuclear export of 60S ribosomal subunits

31 March 2020

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Complementary whole-genome technologies reveal the cellular response to proteasome inhibition by PS-341

31 March 2020

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Communication between levels of transcriptional control improves robustness and adaptivity.

31 March 2020

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Motion as a phenotype: the use of live-cell imaging and machine visual screening to characterize transcription-dependent chromosome dynamics

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Actively transcribed GAL genes can be physically linked to the nuclear pore by the SAGA chromatin modifying complex

31 March 2020

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The proteasome regulatory particle alters the SAGA coactivator to enhance its interactions with transcriptional activators.

31 March 2020

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Immunopurification of polyribosomal complexes of Arabidopsis for global analysis of gene expression

31 March 2020

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Genome-wide analysis of mRNA translation profiles in Saccharomyces cerevisiae

31 March 2020

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Gene expression analyzed by high-resolution state array analysis and quantitative proteomics: response of yeast to mating pheromone

31 March 2020

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Capturing chromosome conformation

31 March 2020

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The active FMR1 promoter is associated with a large domain of altered chromatin conformation with embedded local histone modifications

31 March 2020

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GENE SEQUENCING: The Race for the $1000 Genome

31 March 2020

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Unbiased mapping of transcription factor binding sites along human chromosomes 21 and 22 points to widespread regulation of noncoding RNAs

31 March 2020

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MicroRNA-mediated feedback and feedforward loops are recurrent network motifs in mammals

31 March 2020

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Poly(A)-binding proteins: multifunctional scaffolds for the post-transcriptional control of gene expression

31 March 2020

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Stochasticity in gene expression: from theories to phenotypes

31 March 2020

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CLIP: a method for identifying protein-RNA interaction sites in living cells

31 March 2020

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Real-time kinetics of gene activity in individual bacteria

31 March 2020

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Stochastic protein expression in individual cells at the single molecule level

31 March 2020

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Stochastic mRNA synthesis in mammalian cells

31 March 2020

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Noise in protein expression scales with natural protein abundance

31 March 2020

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Single-cell proteomic analysis of S. cerevisiae reveals the architecture of biological noise

31 March 2020

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Noise in eukaryotic gene expression

31 March 2020

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Contributions of low molecule number and chromosomal positioning to stochastic gene expression

31 March 2020

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Noise in gene expression: origins, consequences, and control

31 March 2020

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Global identification of human transcribed sequences with genome tiling arrays

31 March 2020

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Transcriptional maps of 10 human chromosomes at 5-nucleotide resolution

31 March 2020

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Novel RNAs identified from an in-depth analysis of the transcriptome of human chromosomes 21 and 22

31 March 2020

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31 March 2020

TUF love for "junk" DNA.

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The transcriptional landscape of the mammalian genome

31 March 2020

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Genome-wide distribution of yeast RNA polymerase II and its control by Sen1 helicase

31 March 2020

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Transcriptional noise and the fidelity of initiation by RNA polymerase II.

31 March 2020

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31 March 2020

Identifiers

DOI

10.1038/NRG2223

1 reference

17 August 2017

1 reference