(Q36893573)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18772384%20AND%20SRC:MED&resulttype=core&format=json

13 January 2020

title

Global jumping and domain-specific intersegment transfer between DNA cognate sites of the multidomain transcription factor Oct-1 (English)

1 reference

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13 January 2020

2

1 reference

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13 January 2020

author name string

Michaeleen Doucleff

series ordinal

1

1 reference

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13 January 2020

language of work or name

English

0 references

publication date

4 September 2008

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18772384%20AND%20SRC:MED&resulttype=core&format=json

Proceedings of the National Academy of Sciences of the United States of America

13 January 2020

published in

1 reference

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13 January 2020

volume

105

1 reference

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13 January 2020

issue

37

1 reference

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13 January 2020

page(s)

13871-13876

1 reference

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Probing transcription factor dynamics at the single-molecule level in a living cell

13 January 2020

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2544546

What drives proteins into the major or minor grooves of DNA?

29 September 2017

1 reference

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NMR structural and kinetic characterization of a homeodomain diffusing and hopping on nonspecific DNA.

29 September 2017

1 reference

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Detecting transient intermediates in macromolecular binding by paramagnetic NMR.

29 September 2017

1 reference

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A base-excision DNA-repair protein finds intrahelical lesion bases by fast sliding in contact with DNA.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2544546

Measurement of the contributions of 1D and 3D pathways to the translocation of a protein along DNA.

29 September 2017

1 reference

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T to C substitution at -175 or -173 of the gamma-globin promoter affects GATA-1 and Oct-1 binding in vitro differently but can independently reproduce the hereditary persistence of fetal hemoglobin phenotype in transgenic mice

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2544546

Molecular basis for synergistic transcriptional activation by Oct1 and Sox2 revealed from the solution structure of the 42-kDa Oct1.Sox2.Hoxb1-DNA ternary transcription factor complex

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2544546

Crystal structure of a POU/HMG/DNA ternary complex suggests differential assembly of Oct4 and Sox2 on two enhancers

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2544546

How to get from A to B: strategies for analysing protein motion on DNA.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2544546

The recruitment of SOX/OCT complexes and the differential activity of HOXA1 and HOXB1 modulate the Hoxb1 auto-regulatory enhancer function

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2544546

POU domain factors in the neuroendocrine system: lessons from developmental biology provide insights into human disease

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2544546

DNA recognition by Cys2His2 zinc finger proteins

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2544546

The myb gene family in cell growth, differentiation and apoptosis

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2544546

TROSY in triple-resonance experiments: new perspectives for sequential NMR assignment of large proteins

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2544546

NMRPipe: a multidimensional spectral processing system based on UNIX pipes

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2544546

Crystal structure of the Oct-1 POU domain bound to an octamer site: DNA recognition with tethered DNA-binding modules

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2544546

The lac repressor-operator interaction. 3. Kinetic studies

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2544546

Diffusion-controlled macromolecular interactions

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2544546

Nuclear proteins that bind the human gamma-globin gene promoter: alterations in binding produced by point mutations associated with hereditary persistence of fetal hemoglobin

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2544546

Structures of larger proteins in solution: three- and four-dimensional heteronuclear NMR spectroscopy

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2544546

The DNA binding specificity of the bipartite POU domain and its subdomains

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2544546

TROSY-based z-exchange spectroscopy: application to the determination of the activation energy for intermolecular protein translocation between specific sites on different DNA molecules

27 June 2018

1 reference

Crossref

https://api.crossref.org/works/10.1073%2FPNAS.0805050105

Enthalpic and entropic effects of salt and polyol osmolytes on site-specific protein-DNA association: the integrase Tn916-DNA complex

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2544546

Diffusion-driven mechanisms of protein translocation on nucleic acids. 1. Models and theory.

4 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2544546

Direct Observation of Enhanced Translocation of a Homeodomain between DNA Cognate Sites by NMR Exchange Spectroscopy

4 September 2018

1 reference

Crossref

https://api.crossref.org/works/10.1073%2FPNAS.0805050105

Enhancement of Association Rates by Nonspecific Binding to DNA and Cell Membranes

21 January 2018

1 reference

Crossref

https://api.crossref.org/works/10.1073%2FPNAS.0805050105

How a protein searches for its specific site on DNA: the role of intersegment transfer

21 January 2018

1 reference

https://pubmed.ncbi.nlm.nih.gov/18772384

12 December 2020

Disparate ionic-strength dependencies of on and off rates in protein-protein association

1 reference

https://pubmed.ncbi.nlm.nih.gov/18772384

12 December 2020

Kinetics and mechanism in the reaction of gene regulatory proteins with DNA

1 reference

https://pubmed.ncbi.nlm.nih.gov/18772384

12 December 2020

Oct-1 POU domain-DNA interactions: cooperative binding of isolated subdomains and effects of covalent linkage

1 reference

https://pubmed.ncbi.nlm.nih.gov/18772384

12 December 2020

DNA intersegment transfer, how steroid receptors search for a target site

1 reference

https://pubmed.ncbi.nlm.nih.gov/18772384

12 December 2020

Identifiers

DOI

10.1073/PNAS.0805050105

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18772384%20AND%20SRC:MED&resulttype=core&format=json

13 January 2020

0 references

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18772384%20AND%20SRC:MED&resulttype=core&format=json

13 January 2020

PubMed publication ID

18772384

1 reference