(Q35309786)

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6 February 2020

title

Amyloid-like fibrils from a domain-swapping protein feature a parallel, in-register conformation without native-like interactions (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21715337%20AND%20SRC:MED&resulttype=core&format=json

6 February 2020

2

1 reference

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6 February 2020

Patrick van der Wel

5

1 reference

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6 February 2020

author name string

Jun Li

1

1 reference

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6 February 2020

Ravindra Kodali

3

1 reference

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6 February 2020

V N Sivanandam

4

1 reference

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6 February 2020

language of work or name

English

0 references

publication date

28 June 2011

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21715337%20AND%20SRC:MED&resulttype=core&format=json

Journal of Biological Chemistry

6 February 2020

published in

1 reference

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6 February 2020

volume

286

1 reference

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6 February 2020

issue

33

1 reference

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6 February 2020

page(s)

28988-28995

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21715337%20AND%20SRC:MED&resulttype=core&format=json

The aggregation-enhancing huntingtin N-terminus is helical in amyloid fibrils

6 February 2020

cites work

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Atomic structure of a nanobody-trapped domain-swapped dimer of an amyloidogenic 2-microglobulin variant

27 July 2018

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Solid-state NMR studies of amyloid fibril structure

27 July 2018

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Mechanistic studies of peptide self-assembly: transient α-helices to stable β-sheets

27 July 2018

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β2-microglobulin forms three-dimensional domain-swapped amyloid fibrils with disulfide linkages

27 July 2018

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Magic angle spinning NMR analysis of beta2-microglobulin amyloid fibrils in two distinct morphologies

27 July 2018

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Stacked sets of parallel, in-register beta-strands of beta2-microglobulin in amyloid fibrils revealed by site-directed spin labeling and chemical labeling

27 July 2018

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Prion fibrils of Ure2p assembled under physiological conditions contain highly ordered, natively folded modules

27 July 2018

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Structural polymorphism of Alzheimer Abeta and other amyloid fibrils

27 July 2018

1 reference

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A critical assessment of the role of helical intermediates in amyloid formation by natively unfolded proteins and polypeptides

27 July 2018

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The functional curli amyloid is not based on in-register parallel beta-sheet structure

27 July 2018

1 reference

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Two prion variants of Sup35p have in-register parallel beta-sheet structures, independent of hydration

27 July 2018

1 reference

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Agitation and high ionic strength induce amyloidogenesis of a folded PDZ domain in native conditions.

27 July 2018

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Core structure of amyloid fibrils formed by residues 106-126 of the human prion protein.

27 July 2018

1 reference

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Determination of protein structures in the solid state from NMR chemical shifts

27 July 2018

1 reference

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Amyloid of Rnq1p, the basis of the [PIN+] prion, has a parallel in-register beta-sheet structure

27 July 2018

1 reference

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The point mutation A34F causes dimerization of GB1.

27 July 2018

1 reference

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Molecular architecture of human prion protein amyloid: a parallel, in-register beta-structure

27 July 2018

1 reference

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Dimethylsulfoxide-quenched hydrogen/deuterium exchange method to study amyloid fibril structure

27 July 2018

1 reference

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Atomic structures of amyloid cross-beta spines reveal varied steric zippers

27 July 2018

1 reference

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Polymorphism in the intermediates and products of amyloid assembly

27 July 2018

1 reference

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3D structure of amyloid protofilaments of beta2-microglobulin fragment probed by solid-state NMR.

27 July 2018

1 reference

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Conformational change and assembly through edge beta strands in transthyretin and other amyloid proteins

27 July 2018

1 reference

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The structural biology of protein aggregation diseases: Fundamental questions and some answers

27 July 2018

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Domain swapping in p13suc1 results in formation of native-like, cytotoxic aggregates.

27 July 2018

1 reference

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Protein misfolding, functional amyloid, and human disease

27 July 2018

1 reference

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Runaway domain swapping in amyloid-like fibrils of T7 endonuclease I.

27 July 2018

1 reference

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Deposition diseases and 3D domain swapping

27 July 2018

1 reference

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From chance to frequent encounters: origins of beta2-microglobulin fibrillogenesis

27 July 2018

1 reference

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Amyloid-like fibrils of ribonuclease A with three-dimensional domain-swapped and native-like structure.

27 July 2018

1 reference

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Scrambled prion domains form prions and amyloid

27 July 2018

1 reference

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A model for Ure2p prion filaments and other amyloids: the parallel superpleated beta-structure

27 July 2018

1 reference

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Prevention of domain swapping inhibits dimerization and amyloid fibril formation of cystatin C: use of engineered disulfide bridges, antibodies, and carboxymethylpapain to stabilize the monomeric form of cystatin C.

27 July 2018

1 reference

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A protein contortionist: core mutations of GB1 that induce dimerization and domain swapping

27 July 2018

1 reference

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Mutations in the B1 domain of protein G that delay the onset of amyloid fibril formation in vitro

27 July 2018

1 reference

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Insights into the origin of the tendency of the PI3-SH3 domain to form amyloid fibrils

27 July 2018

1 reference

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Mechanism of inactivation on prion conversion of the Saccharomyces cerevisiae Ure2 protein

27 July 2018

1 reference

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Crystal structure of the human prion protein reveals a mechanism for oligomerization

27 July 2018

1 reference

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Human cystatin C, an amyloidogenic protein, dimerizes through three-dimensional domain swapping

27 July 2018

1 reference

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A domain-swapped RNase A dimer with implications for amyloid formation

27 July 2018

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3D domain swapping: a mechanism for oligomer assembly

27 July 2018

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A thermodynamic scale for the beta-sheet forming tendencies of the amino acids.

27 July 2018

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The 13C chemical-shift index: a simple method for the identification of protein secondary structure using 13C chemical-shift data

27 July 2018

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Fibrils with parallel in-register structure constitute a major class of amyloid fibrils: molecular insights from electron paramagnetic resonance spectroscopy

27 July 2018

1 reference

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Mapping the core of the beta(2)-microglobulin amyloid fibril by H/D exchange

21 January 2018

1 reference

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Domain swapping in N-truncated human cystatin C.

21 January 2018

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Structure of infectious prions: stabilization by domain swapping

21 January 2018

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The GB1 amyloid fibril: recruitment of the peripheral beta-strands of the domain swapped dimer into the polymeric interface

21 January 2018

1 reference

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A systematic exploration of the influence of the protein stability on amyloid fibril formation in vitro

21 January 2018

1 reference

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SPINEVOLUTION: a powerful tool for the simulation of solid and liquid state NMR experiments

21 January 2018

1 reference

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Evidence of fibril-like β-sheet structures in a neurotoxic amyloid intermediate of Alzheimer's β-amyloid.

21 January 2018

1 reference

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TALOS+: a hybrid method for predicting protein backbone torsion angles from NMR chemical shifts

21 January 2018

1 reference

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Rapid amide proton exchange rates in peptides and proteins measured by solvent quenching and two-dimensional NMR.

21 January 2018

1 reference

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A captured folding intermediate involved in dimerization and domain-swapping of GB1.

21 January 2018

1 reference

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Amyloid nucleation triggered by agitation of beta2-microglobulin under acidic and neutral pH conditions

21 January 2018

1 reference

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Intermolecular alignment in β2-microglobulin amyloid fibrils

21 January 2018

1 reference

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Amyloids of shuffled prion domains that form prions have a parallel in-register beta-sheet structure

21 January 2018

1 reference

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Symmetry-based constant-time homonuclear dipolar recoupling in solid state NMR

26 September 2018

1 reference

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Magic-angle spinning solid-state NMR spectroscopy of the beta1 immunoglobulin binding domain of protein G (GB1): 15N and 13C chemical shift assignments and conformational analysis

26 September 2018

1 reference

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Probing Solvent Accessibility of Transthyretin Amyloid by Solution NMR Spectroscopy

26 September 2018

1 reference

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Checking the conformational stability of cystatin C and its L68Q variant by molecular dynamics studies: Why is the L68Q variant amyloidogenic?

26 September 2018

1 reference

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3D domain-swapped human cystatin C with amyloidlike intermolecular β-sheets

21 January 2018

1 reference

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An NMR-based quenched hydrogen exchange investigation of model amyloid fibrils formed by cold shock protein A

21 January 2018

1 reference

https://pubmed.ncbi.nlm.nih.gov/21715337

12 December 2020

Does the location of a mutation determine the ability to form amyloid fibrils?

1 reference

https://pubmed.ncbi.nlm.nih.gov/21715337

12 December 2020

A twisted four-sheeted model for an amyloid fibril

1 reference

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12 December 2020

Broadband carbon-13 correlation spectra of microcrystalline proteins in very high magnetic fields

1 reference

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12 December 2020

Identifiers

DOI

10.1074/JBC.M111.261750

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21715337%20AND%20SRC:MED&resulttype=core&format=json

6 February 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21715337%20AND%20SRC:MED&resulttype=core&format=json

6 February 2020

PubMed publication ID

21715337

1 reference