(Q35131231)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16908844%20AND%20SRC:MED&resulttype=core&format=json

28 December 2019

title

Comprehensive identification of Drosophila dorsal-ventral patterning genes using a whole-genome tiling array (English)

1 reference

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28 December 2019

main subject

Drosophila

0 references

whole genome sequencing

1 reference

5

1 reference

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28 December 2019

John Manak

8

1 reference

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28 December 2019

author name string

Frédéric Biemar

1

1 reference

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28 December 2019

David A Nix

2

1 reference

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28 December 2019

Jessica Piel

3

1 reference

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28 December 2019

Brant Peterson

4

1 reference

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28 December 2019

Victor Sementchenko

6

1 reference

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28 December 2019

Ian Bell

7

1 reference

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28 December 2019

Michael S Levine

9

1 reference

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28 December 2019

language of work or name

English

0 references

publication date

14 August 2006

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16908844%20AND%20SRC:MED&resulttype=core&format=json

Proceedings of the National Academy of Sciences of the United States of America

28 December 2019

published in

1 reference

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28 December 2019

volume

103

1 reference

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28 December 2019

issue

34

1 reference

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28 December 2019

page(s)

12763-12768

1 reference

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The undertranslated transcriptome reveals widespread translational silencing by alternative 5' transcript leaders

28 December 2019

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1636694

The Drosophila microRNA iab-4 causes a dominant homeotic transformation of halteres to wings

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1636694

MicroRNA1 influences cardiac differentiation in Drosophila and regulates Notch signaling

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1636694

Experimental validation of the regulated expression of large numbers of non-coding RNAs from the mouse genome

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1636694

Drosophila microRNAs exhibit diverse spatial expression patterns during embryonic development

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1636694

Dorsoventral axis formation in the Drosophila embryo--shaping and transducing a morphogen gradient

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1636694

Genomic regulatory networks and animal development

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1636694

The developmental biology of Dishevelled: an enigmatic protein governing cell fate and cell polarity

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1636694

Mesodermally expressed Drosophila microRNA-1 is regulated by Twist and is required in muscles during larval growth

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1636694

WntD is a feedback inhibitor of Dorsal/NF-kappaB in Drosophila development and immunity

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1636694

Identification of putative noncoding polyadenylated transcripts in Drosophila melanogaster

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1636694

Transcriptional maps of 10 human chromosomes at 5-nucleotide resolution

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1636694

A comprehensive transcript index of the human genome generated using microarrays and computational approaches

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1636694

Whole-genome analysis of Drosophila gastrulation

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1636694

GenePalette: a universal software tool for genome sequence visualization and analysis

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1636694

pyramus and thisbe: FGF genes that pattern the mesoderm of Drosophila embryos

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1636694

Novel RNAs identified from an in-depth analysis of the transcriptome of human chromosomes 21 and 22

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1636694

Complete sequencing and characterization of 21,243 full-length human cDNAs

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1636694

The small RNA profile during Drosophila melanogaster development

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1636694

Computational identification of Drosophila microRNA genes

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1636694

Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1636694

Whole-genome analysis of dorsal-ventral patterning in the Drosophila embryo

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1636694

The K(A)/K(S) ratio test for assessing the protein-coding potential of genomic regions: an empirical and simulation study

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1636694

Inhibition of the Wnt signaling pathway by Idax, a novel Dvl-binding protein

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1636694

Upstream open reading frames as regulators of mRNA translation

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1636694

Translational control by an upstream open reading frame in the HER-2/neu transcript

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1636694

The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1636694

PAML: a program package for phylogenetic analysis by maximum likelihood

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1636694

The Drosophila bunched gene is a homologue of the growth factor stimulated mammalian TSC-22 sequence and is required during oogenesis

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1636694

Likelihood-mapping: a simple method to visualize phylogenetic content of a sequence alignment

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1636694

Genes expressed in neurons of adult male Drosophila

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1636694

roX1 RNA paints the X chromosome of male Drosophila and is regulated by the dosage compensation system

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1636694

Characterization of two RNAs transcribed from the cis-regulatory region of the abd-A domain within the Drosophila bithorax complex

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1636694

The dorsal morphogen gradient regulates the mesoderm determinant twist in early Drosophila embryos

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1636694

Spatial regulation of microRNA gene expression in the Drosophila embryo.

28 July 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0604484103

Drosophila WntD is a target and an inhibitor of the Dorsal/Twist/Snail network in the gastrulating embryo

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0604484103

XIdax, an inhibitor of the canonical Wnt pathway, is required for anterior neural structure formation in Xenopus

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0604484103

Role of two upstream open reading frames in the translational control of oncogene mdm2.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0604484103

Shaping BMP morphogen gradients in the Drosophila embryo and pupal wing.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0604484103

Identification and expression analysis of putative mRNA-like non-coding RNA in Drosophila.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0604484103

Large-scale transcriptional activity in chromosomes 21 and 22

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0604484103

Global identification of human transcribed sequences with genome tiling arrays

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0604484103

The transcriptional landscape of the mammalian genome

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0604484103

Mapping of conserved RNA secondary structures predicts thousands of functional noncoding RNAs in the human genome

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0604484103

Shortsighted acts in the decapentaplegic pathway in Drosophila eye development and has homology to a mouse TGF-beta-responsive gene.

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1636694

27 September 2018

Identifiers

DOI

10.1073/PNAS.0604484103

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16908844%20AND%20SRC:MED&resulttype=core&format=json

28 December 2019

0 references

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16908844%20AND%20SRC:MED&resulttype=core&format=json

28 December 2019

PubMed publication ID

16908844

1 reference