(Q34313279)

1 August 2017

title

Detecting differential usage of exons from RNA-seq data (English)

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1 August 2017

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1 reference

Alejandro Reyes

2

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Simon Anders

object named as

Simon Anders

series ordinal

1

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Wolfgang Huber

object named as

Wolfgang Huber

series ordinal

3

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publication date

21 June 2012

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1 August 2017

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1 August 2017

volume

22

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1 August 2017

issue

10

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1 August 2017

page(s)

2008-2017

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Identifying differentially expressed transcripts from RNA-seq data with biological variation

1 August 2017

cites work

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Differential expression analysis of multifactor RNA-Seq experiments with respect to biological variation

6 July 2018

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6 July 2018

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6 July 2018

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6 July 2018

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6 July 2018

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6 July 2018

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6 July 2018

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Improving RNA-Seq expression estimates by correcting for fragment bias

6 July 2018

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Haplotype and isoform specific expression estimation using multi-mapping RNA-seq reads.

6 July 2018

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Analysis and design of RNA sequencing experiments for identifying isoform regulation

6 July 2018

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6 July 2018

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Differential expression analysis for sequence count data

6 July 2018

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Conservation of an RNA regulatory map between Drosophila and mammals

6 July 2018

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Alternative expression analysis by RNA sequencing

6 July 2018

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baySeq: empirical Bayesian methods for identifying differential expression in sequence count data

6 July 2018

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Independent filtering increases detection power for high-throughput experiments

6 July 2018

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Transcript assembly and quantification by RNA-Seq reveals unannotated transcripts and isoform switching during cell differentiation

6 July 2018

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Fast and SNP-tolerant detection of complex variants and splicing in short reads

6 July 2018

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Expansion of the eukaryotic proteome by alternative splicing

6 July 2018

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Sex-specific and lineage-specific alternative splicing in primates

6 July 2018

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The Pfam protein families database

6 July 2018

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edgeR: a Bioconductor package for differential expression analysis of digital gene expression data

6 July 2018

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6 July 2018

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TopHat: discovering splice junctions with RNA-Seq

6 July 2018

1 reference

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Statistical inferences for isoform expression in RNA-Seq

6 July 2018

1 reference

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Alternative isoform regulation in human tissue transcriptomes

6 July 2018

1 reference

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FlyBase: enhancing Drosophila Gene Ontology annotations

6 July 2018

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FIRMA: a method for detection of alternative splicing from exon array data

6 July 2018

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Moderated statistical tests for assessing differences in tag abundance

6 July 2018

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Small-sample estimation of negative binomial dispersion, with applications to SAGE data

6 July 2018

1 reference

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Sequence finishing and mapping of Drosophila melanogaster heterochromatin

6 July 2018

1 reference

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Identifying differential expression in multiple SAGE libraries: an overdispersed log-linear model approach

6 July 2018

1 reference

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ANOSVA: a statistical method for detecting splice variation from expression data

6 July 2018

1 reference

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A novel phospholipase C, PLC(eta)2, is a neuron-specific isozyme

6 July 2018

1 reference

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Bioconductor: open software development for computational biology and bioinformatics

6 July 2018

1 reference

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Differential expression in SAGE: accounting for normal between-library variation.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3460195

Protein kinase Czeta (PKCzeta): activation mechanisms and cellular functions

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3460195

Significance analysis of microarrays applied to the ionizing radiation response

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3460195

Cloning, mRNA expression, and chromosomal mapping of mouse and human preprocortistatin

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3460195

Activation of human phospholipase C-eta2 by Gbetagamma

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3460195

28 October 2018

Identifiers

DOI

10.1101/GR.133744.111

1 reference

1 August 2017

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1 August 2017

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