(Q33935676)

30 July 2017

title

Prediction of operons in microbial genomes (English)

1 reference

30 July 2017

3

1 reference

30 July 2017

M D Ermolaeva

1

1 reference

30 July 2017

O White

series ordinal

2

1 reference

30 July 2017

language of work or name

English

0 references

publication date

1 March 2001

1 reference

30 July 2017

published in

Nucleic Acids Research

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30 July 2017

volume

29

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30 July 2017

issue

5

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30 July 2017

page(s)

1216-1221

1 reference

Genome sequence of the endocellular bacterial symbiont of aphids Buchnera sp. APS

30 July 2017

cites work

1 reference

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Lateral gene transfer and the nature of bacterial innovation

5 July 2018

1 reference

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Operons in Escherichia coli: genomic analyses and predictions

5 July 2018

1 reference

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Modeling and predicting transcriptional units of Escherichia coli genes using hidden Markov models

5 July 2018

1 reference

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An automated comparative analysis of 17 complete microbial genomes

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=29727

Transcription attenuation: once viewed as a novel regulatory strategy

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=29727

Selfish operons: the evolutionary impact of gene clustering in prokaryotes and eukaryotes

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=29727

The use of gene clusters to infer functional coupling

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=29727

Linkage map of Escherichia coli K-12, edition 10: the traditional map

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=29727

RegulonDB: a database on transcriptional regulation in Escherichia coli

5 July 2018

1 reference

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Selfish operons and speciation by gene transfer

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=29727

The complete genome sequence of Escherichia coli K-12

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=29727

Gapped BLAST and PSI-BLAST: a new generation of protein database search programs

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=29727

The dnaK operon of Bacillus subtilis is heptacistronic

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=29727

In vivo evidence that the nusA and infB genes of E. coli are part of the same multi-gene operon which encodes at least four proteins.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=29727

The existence of two genes between infB and rpsO in the Escherichia coli genome: DNA sequencing and S1 nuclease mapping

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=29727

Basic local alignment search tool

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=29727

A probabilistic learning approach to whole-genome operon prediction.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=29727

Evolutionary instability of operon structures disclosed by sequence comparisons of complete microbial genomes.

29 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=29727

29 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=29727

The mutL repair gene of Escherichia coli K-12 forms a superoperon with a gene encoding a new cell-wall amidase

29 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=29727

A historical perspective on gene/protein functional assignment

29 October 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/11222772

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Exploitation of gene context

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/11222772

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Conserved gene clusters in bacterial genomes provide further support for the primacy of RNA

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/11222772

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1093/NAR/29.5.1216

1 reference

30 July 2017

1 reference

30 July 2017

1 reference