(Q33526362)

27 July 2017

title

3'-end sequencing for expression quantification (3SEQ) from archival tumor samples (English)

1 reference

27 July 2017

8

Robert Tibshirani

0 references

Daniela Witten

3

object named as

Daniela M Witten

0 references

Joseph W Foley

object named as

Joseph W Foley

5

0 references

Matt van de Rijn

9

object named as

Matt van de Rijn

1 reference

27 July 2017

4

Shirley Zhu

1 reference

27 July 2017

Andrew H Beck

1

1 reference

27 July 2017

Ziming Weng

2

1 reference

27 July 2017

Phil Lacroute

6

1 reference

27 July 2017

Cheryl L Smith

7

1 reference

27 July 2017

Arend Sidow

10

1 reference

27 July 2017

Robert B West

11

1 reference

27 July 2017

language of work or name

English

0 references

publication date

19 January 2010

1 reference

27 July 2017

1 reference

27 July 2017

volume

5

1 reference

27 July 2017

issue

1

1 reference

27 July 2017

page(s)

e8768

1 reference

Creative Commons Attribution 4.0 International

27 July 2017

copyright license

start time

19 January 2010

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

cites work

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21 June 2018

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21 June 2018

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21 June 2018

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21 June 2018

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21 June 2018

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21 June 2018

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21 June 2018

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21 June 2018

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21 June 2018

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RNA expression analysis from formalin fixed paraffin embedded tissues

21 June 2018

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21 June 2018

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21 June 2018

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21 June 2018

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The fibromatosis signature defines a robust stromal response in breast carcinoma

21 June 2018

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Enabling personalized cancer medicine through analysis of gene-expression patterns

21 June 2018

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Acquisition of biologically relevant gene expression data by Affymetrix microarray analysis of archival formalin-fixed paraffin-embedded tumours

21 June 2018

1 reference

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Dynamic regulation of nucleosome positioning in the human genome

21 June 2018

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21 June 2018

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Desmoid tumor: a disease opportune for molecular insights

21 June 2018

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Genome-wide profiles of STAT1 DNA association using chromatin immunoprecipitation and massively parallel sequencing

21 June 2018

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Insulin receptor activation in solitary fibrous tumours

21 June 2018

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Successful application of microarray technology to microdissected formalin-fixed, paraffin-embedded tissue

21 June 2018

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Critical review of published microarray studies for cancer outcome and guidelines on statistical analysis and reporting

21 June 2018

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Genomic signatures to guide the use of chemotherapeutics.

21 June 2018

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Preliminary comparison of quantity, quality, and microarray performance of RNA extracted from formalin-fixed, paraffin-embedded, and unfixed frozen tissue samples

21 June 2018

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Technology insight: Application of molecular techniques to formalin-fixed paraffin-embedded tissues from breast cancer

21 June 2018

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Roadmap for developing and validating therapeutically relevant genomic classifiers

21 June 2018

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Determination of stromal signatures in breast carcinoma

21 June 2018

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A multigene assay to predict recurrence of tamoxifen-treated, node-negative breast cancer

21 June 2018

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A module map showing conditional activity of expression modules in cancer

21 June 2018

1 reference

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Large-scale meta-analysis of cancer microarray data identifies common transcriptional profiles of neoplastic transformation and progression

21 June 2018

1 reference

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Use of gene-expression profiling to identify prognostic subclasses in adult acute myeloid leukemia

21 June 2018

1 reference

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Gene expression profiling identifies clinically relevant subtypes of prostate cancer

21 June 2018

1 reference

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Measurement of gene expression in archival paraffin-embedded tissues: development and performance of a 92-gene reverse transcriptase-polymerase chain reaction assay

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2808244

The KEGG resource for deciphering the genome

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2808244

Predictive ability of DNA microarrays for cancer outcomes and correlates: an empirical assessment

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2808244

Statistical significance for genomewide studies

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2808244

DAVID: Database for Annotation, Visualization, and Integrated Discovery

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2808244

A gene-expression signature as a predictor of survival in breast cancer

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2808244

Microarrays as cancer keys: an array of possibilities.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2808244

Microarray and histopathological analysis of tumours: the future and the past?

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2808244

Gene expression profiling predicts clinical outcome of breast cancer

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2808244

Multiclass cancer diagnosis using tumor gene expression signatures

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2808244

Significance analysis of microarrays applied to the ionizing radiation response

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2808244

Molecular classification of cutaneous malignant melanoma by gene expression profiling

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2808244

21 June 2018

Wnt signaling and cancer

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2808244

Systematic variation in gene expression patterns in human cancer cell lines

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2808244

Distinct types of diffuse large B-cell lymphoma identified by gene expression profiling

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2808244

Molecular classification of cancer: class discovery and class prediction by gene expression monitoring

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2808244

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21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2808244

High density synthetic oligonucleotide arrays

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2808244

Gene expression profiles of laser-captured adjacent neuronal subtypes

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2808244

Increased beta-catenin protein and somatic APC mutations in sporadic aggressive fibromatoses (desmoid tumors).

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2808244

Use of a cDNA microarray to analyse gene expression patterns in human cancer

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2808244

Expression of insulin-like growth factor 2 in mesenchymal neoplasms

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2808244

Quantitative expression profiling of RNA from formalin-fixed, paraffin-embedded tissues using randomly assembled bead arrays.

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2808244

Prognostic significance of macrophage infiltration in leiomyosarcomas.

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2808244

Taking gene-expression profiling to the clinic: when will molecular signatures become relevant to patient care?

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2808244

Analysis of APC/beta-catenin genes mutations and Wnt signalling pathway in desmoid-type fibromatosis.

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2808244

Analysing differential gene expression in cancer.

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2808244

RNA expression analysis of formalin-fixed paraffin-embedded tumors

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2808244

Global gene expression profiling of formalin-fixed paraffin-embedded tumor samples: a comparison to snap-frozen material using oligonucleotide microarrays

31 October 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/20098735

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Predominance of beta-catenin mutations and beta-catenin dysregulation in sporadic aggressive fibromatosis (desmoid tumor)

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/20098735

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Molecular characterisation of soft tissue tumours: a gene expression study

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/20098735

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1371/JOURNAL.PONE.0008768

1 reference

27 July 2017

0 references

1 reference

27 July 2017

1 reference