(Q30488332)

19 August 2017

Nontarget DNA binding shapes the dynamic landscape for enzymatic recognition of DNA damage (English)

1 reference

19 August 2017

0 references

Joshua I Friedman

1

1 reference

19 August 2017

Ananya Majumdar

series ordinal

2

1 reference

19 August 2017

James T Stivers

series ordinal

3

1 reference

19 August 2017

language of work or name

English

0 references

publication date

1 April 2009

1 reference

19 August 2017

Nucleic Acids Research

1 reference

19 August 2017

37

1 reference

19 August 2017

11

1 reference

19 August 2017

3493-3500

1 reference

Uracil DNA glycosylase uses DNA hopping and short-range sliding to trap extrahelical uracils

19 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2699497

Characterization of enzyme motions by solution NMR relaxation dispersion.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2699497

Extrahelical damaged base recognition by DNA glycosylase enzymes

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2699497

Enzymatic capture of an extrahelical thymine in the search for uracil in DNA

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2699497

Genomic uracil and human disease

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2699497

Relating protein motion to catalysis

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2699497

Intrinsic dynamics of an enzyme underlies catalysis

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2699497

NMR chemical shift and relaxation measurements provide evidence for the coupled folding and binding of the p53 transactivation domain

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2699497

Dynamic opening of DNA during the enzymatic search for a damaged base

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2699497

ElNemo: a normal mode web server for protein movement analysis and the generation of templates for molecular replacement

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2699497

A mechanistic perspective on the chemistry of DNA repair glycosylases

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2699497

Nuclear magnetic resonance methods for quantifying microsecond-to-millisecond motions in biological macromolecules

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2699497

Solution-state NMR investigations of triosephosphate isomerase active site loop motion: ligand release in relation to active site loop dynamics

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2699497

Uracil-DNA glycosylase-DNA substrate and product structures: conformational strain promotes catalytic efficiency by coupled stereoelectronic effects

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2699497

Kinetic mechanism of damage site recognition and uracil flipping by Escherichia coli uracil DNA glycosylase

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2699497

NMRPipe: a multidimensional spectral processing system based on UNIX pipes

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2699497

Crystal structure and mutational analysis of human uracil-DNA glycosylase: structural basis for specificity and catalysis

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2699497

The catalytic power of uracil DNA glycosylase in the opening of thymine base pairs

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2699497

DNA recognition by the brinker repressor--an extreme case of coupling between binding and folding.

26 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2699497

The origins of high-affinity enzyme binding to an extrahelical DNA base

26 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2699497

NMR R1 rho rotating-frame relaxation with weak radio frequency fields

26 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2699497

Human uracil-DNA glycosylase deficiency associated with profoundly impaired immunoglobulin class-switch recombination

26 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2699497

[13C]-constant-time [15N,1H]-TROSY-HNCA for sequential assignments of large proteins

26 November 2018

1 reference

https://pubmed.ncbi.nlm.nih.gov/19339520

12 December 2020

A TROSY CPMG sequence for characterizing chemical exchange in large proteins

1 reference

https://pubmed.ncbi.nlm.nih.gov/19339520

12 December 2020

Two-state allosteric behavior in a single-domain signaling protein

1 reference

https://pubmed.ncbi.nlm.nih.gov/19339520

12 December 2020

Improved 3D triple resonance experiments, HNN and HN(C)N, for HN and 15N sequential correlations in (13C, 15N) labeled proteins: application to unfolded proteins

1 reference

https://pubmed.ncbi.nlm.nih.gov/19339520

12 December 2020

Evidence for flexibility in the function of ribonuclease A

1 reference

https://pubmed.ncbi.nlm.nih.gov/19339520

12 December 2020

NMR characterization of the dynamics of biomacromolecules

1 reference

https://pubmed.ncbi.nlm.nih.gov/19339520

12 December 2020

Flap opening and dimer-interface flexibility in the free and inhibitor-bound HIV protease, and their implications for function

1 reference

https://pubmed.ncbi.nlm.nih.gov/19339520

12 December 2020

Identifiers

DOI

10.1093/NAR/GKP161

1 reference

19 August 2017

1 reference

19 August 2017

PubMed publication ID

19339520

1 reference