(Q30477370)

30 October 2017

The X chromosome is organized into a gene-rich outer rim and an internal core containing silenced nongenic sequences (English)

1 reference

30 October 2017

0 references

Christine Moulton Clemson

1

1 reference

30 October 2017

Lisa L Hall

2

1 reference

30 October 2017

Meg Byron

3

1 reference

30 October 2017

John McNeil

4

1 reference

30 October 2017

Jeanne Bentley Lawrence

5

1 reference

30 October 2017

language of work or name

English

0 references

publication date

8 May 2006

1 reference

Proceedings of the National Academy of Sciences of the United States of America

30 October 2017

1 reference

30 October 2017

103

1 reference

30 October 2017

20

1 reference

30 October 2017

7688-7693

1 reference

Word frequency analysis reveals enrichment of dinucleotide repeats on the human X chromosome and [GATA]n in the X escape region

30 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1472506

Dark matter in the genome: evidence of widespread transcription detected by microarray tiling experiments

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1472506

Ubiquitinated proteins including uH2A on the human and mouse inactive X chromosome: enrichment in gene rich bands.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1472506

Multiple spatially distinct types of facultative heterochromatin on the human inactive X chromosome

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1472506

A stable proteinaceous structure in the territory of inactive X chromosomes

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1472506

The 4q subtelomere harboring the FSHD locus is specifically anchored with peripheral heterochromatin unlike most human telomeres

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1472506

Active genes dynamically colocalize to shared sites of ongoing transcription

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1472506

Chromatin decondensation and nuclear reorganization of the HoxB locus upon induction of transcription

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1472506

RNA regulation: a new genetics?

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1472506

The mammalian transcriptome and the function of non-coding DNA sequences

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1472506

The cell biology of a novel chromosomal RNA: chromosome painting by XIST/Xist RNA initiates a remodeling cascade

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1472506

Forming facultative heterochromatin: silencing of an X chromosome in mammalian females

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1472506

Epigenetic dynamics of imprinted X inactivation during early mouse development

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1472506

Repositioning of Muscle-specific Genes Relative to the Periphery of SC-35 Domains during Skeletal Myogenesis

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1472506

Scaffold attachment factor A (SAF-A) is concentrated in inactive X chromosome territories through its RGG domain

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1472506

Asynchronous duplication of human chromosomes and the origin of sex chromatin

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1472506

Clustering of multiple specific genes and gene-rich R-bands around SC-35 domains: evidence for local euchromatic neighborhoods

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1472506

Gene density and transcription influence the localization of chromatin outside of chromosome territories detectable by FISH.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1472506

Unbalanced X;autosome translocations provide evidence for sequence specificity in the association of XIST RNA with chromatin

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1472506

Chromosome positioning in the interphase nucleus

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1472506

Identifying novel transcripts and novel genes in the human genome by using novel SAGE tags

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1472506

Mitotically stable association of polycomb group proteins eed and enx1 with the inactive x chromosome in trophoblast stem cells

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1472506

An ectopic human XIST gene can induce chromosome inactivation in postdifferentiation human HT-1080 cells

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1472506

Spatial organization of active and inactive genes and noncoding DNA within chromosome territories

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1472506

Chromosome territories, nuclear architecture and gene regulation in mammalian cells

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1472506

Mini review: form and function in the human interphase chromosome.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1472506

Molecular evidence for a relationship between LINE-1 elements and X chromosome inactivation: the Lyon repeat hypothesis

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1472506

Large-scale chromatin organization of the major histocompatibility complex and other regions of human chromosome 6 and its response to interferon in interphase nuclei

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1472506

A first-generation X-inactivation profile of the human X chromosome

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1472506

The 3D positioning of ANT2 and ANT3 genes within female X chromosome territories correlates with gene activity.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1472506

Spatial relationship between transcription sites and chromosome territories

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1472506

Stabilization and localization of Xist RNA are controlled by separate mechanisms and are not sufficient for X inactivation

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1472506

Difference in chromatin packaging between active and inactive X chromosomes by fractionation and allele-specific detection

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1472506

Three-dimensional reconstruction of painted human interphase chromosomes: active and inactive X chromosome territories have similar volumes but differ in shape and surface structure

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1472506

Active and inactive genes localize preferentially in the periphery of chromosome territories

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1472506

Multifunctional compartments in the nucleus: insights from DNA and RNA localization

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1472506

XIST RNA paints the inactive X chromosome at interphase: evidence for a novel RNA involved in nuclear/chromosome structure

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1472506

Nonrandom gene organization: structural arrangements of specific pre-mRNA transcription and splicing with SC-35 domains

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1472506

Evidence for a nuclear compartment of transcription and splicing located at chromosome domain boundaries

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1472506

X-chromosome inactivation: molecular mechanisms and genetic consequences

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1472506

Escape from X inactivation in human and mouse

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1472506

Replication timing of genes and middle repetitive sequences.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1472506

Repeated sequences in DNA. Hundreds of thousands of copies of DNA sequences have been incorporated into the genomes of higher organisms

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1472506

Sensitive, high-resolution chromatin and chromosome mapping in situ: presence and orientation of two closely integrated copies of EBV in a lymphoma line

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1472506

A simple, rapid technique for precise mapping of multiple sequences in two colors using a single optical filter set.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1472506

The human XIST gene: analysis of a 17 kb inactive X-specific RNA that contains conserved repeats and is highly localized within the nucleus

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1472506

The product of the mouse Xist gene is a 15 kb inactive X-specific transcript containing no conserved ORF and located in the nucleus

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1472506

Sequence organization in animal DNA and a speculation on hnRNA as a coordinate regulatory transcript

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1472506

Regulation of gene expression: possible role of repetitive sequences

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1472506

Topology of genes and nontranscribed sequences in human interphase nuclei

20 June 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0601069103

Inheritance of a pre-inactivated paternal X chromosome in early mouse embryos.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0601069103

X-chromosome inactivation: a repeat hypothesis

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0601069103

Integrated kinetics of X chromosome inactivation in differentiating embryonic stem cells.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0601069103

Spatial distribution of GC- and AT-rich DNA sequences within human chromosome territories

21 January 2018

1 reference

https://pubmed.ncbi.nlm.nih.gov/16682630

12 December 2020

Relative locations of the centromere and imprinted SNRPN gene within chromosome 15 territories during the cell cycle in HL60 cells

1 reference

https://pubmed.ncbi.nlm.nih.gov/16682630

12 December 2020

XIST RNA associates with specific regions of the inactive X chromatin

1 reference

https://pubmed.ncbi.nlm.nih.gov/16682630

12 December 2020

Temporal resolution and sequential expression of muscle-specific genes revealed by in situ hybridization

1 reference

https://pubmed.ncbi.nlm.nih.gov/16682630

12 December 2020

Higher level organization of individual gene transcription and RNA splicing

1 reference

https://pubmed.ncbi.nlm.nih.gov/16682630

12 December 2020

Metaphase chromosome structure: bands arise from a differential folding path of the highly AT-rich scaffold

1 reference

https://pubmed.ncbi.nlm.nih.gov/16682630

12 December 2020

Xist RNA exhibits a banded localization on the inactive X chromosome and is excluded from autosomal material in cis

1 reference

https://pubmed.ncbi.nlm.nih.gov/16682630

12 December 2020

Correlations between sex chromatin and sex chromosomes

1 reference

https://pubmed.ncbi.nlm.nih.gov/16682630

12 December 2020

Large-scale chromatin organization and the localization of proteins involved in gene expression in human cells

1 reference

https://pubmed.ncbi.nlm.nih.gov/16682630

12 December 2020

Three-dimensional arrangements of centromeres and telomeres in nuclei of human and murine lymphocytes

1 reference

https://pubmed.ncbi.nlm.nih.gov/16682630

12 December 2020

Identifiers

DOI

10.1073/PNAS.0601069103

1 reference

30 October 2017

0 references

1 reference

30 October 2017

PubMed publication ID

16682630

1 reference