(Q29617046)

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12 February 2020

title

Architecture of the human regulatory network derived from ENCODE data (English)

2 references

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30 April 2017

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12 February 2020

2

1 reference

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12 February 2020

Joel Rozowsky

9

1 reference

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12 February 2020

Alexej Abyzov

13

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12 February 2020

Alan P. Boyle

16

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12 February 2020

Jason Gertz

26

1 reference

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12 February 2020

Timothy E. Reddy

42

1 reference

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12 February 2020

Kevin Y Yip

49

1 reference

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12 February 2020

Peggy Farnham

53

1 reference

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12 February 2020

56

Michael Snyder

1 reference

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12 February 2020

1

Mark B Gerstein

1 reference

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12 February 2020

51

Serafim Batzoglou

1 reference

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12 February 2020

author name string

Manoj Hariharan

3

1 reference

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12 February 2020

Stephen G Landt

4

1 reference

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12 February 2020

Koon-Kiu Yan

5

1 reference

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12 February 2020

Chao Cheng

6

1 reference

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12 February 2020

Xinmeng Jasmine Mu

7

1 reference

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12 February 2020

Ekta Khurana

8

1 reference

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12 February 2020

Roger Alexander

10

1 reference

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12 February 2020

Renqiang Min

11

1 reference

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12 February 2020

Pedro Alves

12

1 reference

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12 February 2020

Nick Addleman

14

1 reference

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12 February 2020

Nitin Bhardwaj

15

1 reference

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12 February 2020

Philip Cayting

17

1 reference

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12 February 2020

Alexandra Charos

18

1 reference

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12 February 2020

David Z Chen

19

1 reference

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12 February 2020

Yong Cheng

20

1 reference

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12 February 2020

Declan Clarke

21

1 reference

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12 February 2020

Catharine Eastman

22

1 reference

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12 February 2020

Ghia Euskirchen

23

1 reference

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12 February 2020

Seth Frietze

24

1 reference

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12 February 2020

Yao Fu

25

1 reference

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12 February 2020

Fabian Grubert

27

1 reference

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12 February 2020

Arif Harmanci

28

1 reference

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12 February 2020

Preti Jain

29

1 reference

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12 February 2020

Maya Kasowski

30

1 reference

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12 February 2020

Phil Lacroute

31

1 reference

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12 February 2020

Jing Jane Leng

32

1 reference

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12 February 2020

Jin Lian

33

1 reference

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12 February 2020

Hannah Monahan

34

1 reference

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12 February 2020

Henriette O'Geen

35

1 reference

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12 February 2020

Zhengqing Ouyang

36

1 reference

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12 February 2020

E Christopher Partridge

37

1 reference

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12 February 2020

Dorrelyn Patacsil

38

1 reference

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12 February 2020

Florencia Pauli

39

1 reference

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12 February 2020

Debasish Raha

40

1 reference

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12 February 2020

Lucia Ramirez

41

1 reference

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12 February 2020

Brian Reed

43

1 reference

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12 February 2020

Minyi Shi

44

1 reference

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12 February 2020

Teri Slifer

45

1 reference

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12 February 2020

Jing Wang

46

1 reference

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12 February 2020

Linfeng Wu

47

1 reference

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12 February 2020

Xinqiong Yang

48

1 reference

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12 February 2020

Gili Zilberman-Schapira

50

1 reference

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12 February 2020

Arend Sidow

52

1 reference

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12 February 2020

Richard M Myers

54

1 reference

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12 February 2020

Sherman M Weissman

55

1 reference

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12 February 2020

language of work or name

1 reference

30 April 2017

publication date

1 September 2012

1 reference

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12 February 2020

2 references

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/esummary.fcgi?db=pubmed&retmode=json&id=22955619

30 April 2017

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12 February 2020

volume

489

2 references

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30 April 2017

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22955619%20AND%20SRC:MED&resulttype=core&format=json

12 February 2020

issue

7414

2 references

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30 April 2017

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22955619%20AND%20SRC:MED&resulttype=core&format=json

12 February 2020

page(s)

91-100

2 references

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30 April 2017

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22955619%20AND%20SRC:MED&resulttype=core&format=json

Creative Commons Attribution-NonCommercial-ShareAlike 3.0 Unported

12 February 2020

copyright license

start time

1 September 2012

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

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3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4154057

Genomic analysis reveals a tight link between transcription factor dynamics and regulatory network architecture

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4154057

Transcriptional regulatory circuits: predicting numbers from alphabets

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4154057

Chromatin structure analyses identify miRNA promoters

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4154057

Genome-wide occupancy of SREBP1 and its partners NFY and SP1 reveals novel functional roles and combinatorial regulation of distinct classes of genes

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4154057

Interplay between network structures, regulatory modes and sensing mechanisms of transcription factors in the transcriptional regulatory network of E. coli

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4154057

Integrating physical and genetic maps: from genomes to interaction networks

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4154057

Genetic reconstruction of a functional transcriptional regulatory network

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4154057

Hierarchy and feedback in the evolution of the Escherichia coli transcription network

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4154057

Genomic analysis of the hierarchical structure of regulatory networks

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4154057

Design principles of molecular networks revealed by global comparisons and composite motifs

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4154057

Uncovering a hidden distributed architecture behind scale-free transcriptional regulatory networks

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4154057

Topological units of environmental signal processing in the transcriptional regulatory network of Escherichia coli.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4154057

Close encounters of many kinds: Fos-Jun interactions that mediate transcription regulatory specificity.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4154057

Positive regulators of the lineage-specific transcription factor GATA-1 in differentiating erythroid cells

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4154057

Fos and Jun: the AP-1 connection

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4154057

Rewiring of transcriptional regulatory networks: hierarchy, rather than connectivity, better reflects the importance of regulators.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4154057

An integrated encyclopedia of DNA elements in the human genome

26 November 2018

1 reference

Crossref

https://api.crossref.org/works/10.1038%2FNATURE11245

inferred from DOI database lookup

7 January 2021

based on heuristic

Classification of human genomic regions based on experimentally determined binding sites of more than 100 transcription-related factors

1 reference

Crossref

https://api.crossref.org/works/10.1038%2FNATURE11245

inferred from DOI database lookup

7 January 2021

based on heuristic

Identifiers

3 references

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/esummary.fcgi?db=pubmed&retmode=json&id=22955619

30 April 2017

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22955619%20AND%20SRC:MED&resulttype=core&format=json

Dimensions Publication ID

12 February 2020

1028790868

0 references

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/esummary.fcgi?db=pubmed&retmode=json&id=22955619

3 references

30 April 2017

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22955619%20AND%20SRC:MED&resulttype=core&format=json

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/esummary.fcgi?db=pubmed&retmode=json&id=22955619

12 February 2020

PubMed publication ID

3 references

30 April 2017

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22955619%20AND%20SRC:MED&resulttype=core&format=json