(Q28131736)

protein structure prediction

title

Prediction of the secondary structure of proteins from their amino acid sequence (English)

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main subject

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protein structure

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amino acid sequence

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A364941

8 April 2023

author name string

Peter Y. Chou

1

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Gerald D. Fasman

2

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P. Y. Chou

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A364941

8 April 2023

G. D. Fasman

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A364941

full work available at URL

8 April 2023

language of work or name

English

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publication date

1978

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22 November 2006

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https://api.wiley.com/onlinelibrary/tdm/v1/articles/10.1002%2F9780470122921.ch2

1 reference

https://api.crossref.org/works/10.1002/9780470122921.CH2

https://onlinelibrary.wiley.com/doi/full/10.1002/9780470122921.ch2

8 April 2023

1 reference

https://api.crossref.org/works/10.1002/9780470122921.CH2

Advances in Enzymology and Related Areas of Molecular Biology

8 April 2023

published in

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volume

47

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page(s)

45-148

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cites work

Comparison of the predicted and observed secondary structure of T4 phage lysozyme

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Chain reversals in proteins

21 January 2018

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Analysis of Conformations of Amino Acid Residues and Prediction of Backbone Topography in Proteins

21 January 2018

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Analysis of code relating sequences to conformation in globular proteins. Theory and application of expected information

21 January 2018

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Analysis of the code relating sequence to conformation in globular proteins. Development of a stereochemical alphabet on the basis of intra-residue information

21 January 2018

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Analysis of the code relating sequence to conformation in globular proteins. An informational analysis of the role of the residue in determining the conformation of its neighbours in the primary sequence

21 January 2018

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Analysis of the code relating sequence to conformation in globular proteins. The distribution of residue pairs in turns and kinks in the backbone chain

21 January 2018

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Pancreatic Trypsin Inhibitor (Kunitz): Part I: Structure and function

21 January 2018

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An assessment of protein secondary structure prediction methods based on amino acid sequence

21 January 2018

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Conformational studies of corticotropin1–32 and constitutive peptides by circular dichroism

21 January 2018

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The prediction of the conformation of membrane proteins from the sequence of amino acids

21 January 2018

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Iso-cytochrome c species from baker's yeast. Analysis of their circular-dichroism spectra

21 January 2018

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The Structure of Cytochrome b5 at 2.0 A Resolution

21 January 2018

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Crystallographic refinement of the structure of bovine pancreatic trypsin inhibitor at l.5 Å resolution

21 January 2018

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The kinetics of formation of native ribonuclease during oxidation of the reduced polypeptide chain

21 January 2018

3

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Role of proline in polypeptide chain configuration of proteins

8 April 2023

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A CORRELATION BETWEEN AMINO ACID COMPOSITION AND PROTEIN STRUCTURE.

8 April 2023

5

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A study of the correlation between the amino acid composition and the helical content of proteins

8 April 2023

8

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Relation of amino acid composition and the moffitt parameters to the secondary structure of proteins

8 April 2023

9

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Structure of myoglobin: A three-dimensional Fourier synthesis at 2 A. resolution

8 April 2023

11

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Structure of haemoglobin: a three-dimensional Fourier synthesis at 5.5-A. resolution, obtained by X-ray analysis

8 April 2023

12

1 reference

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Amino-Acid Sequence of Sperm Whale Myoglobin

8 April 2023

13

1 reference

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8 April 2023

THE HEMOGLOBINS

14

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The influence of amino-acid sequence on protein structure

8 April 2023

15

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Correlation between the distribution of amino acids and alpha helices

8 April 2023

16

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Recognition of alpha-helical segments in proteins of known primary structure

8 April 2023

17

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Prediction of alpha-helical regions in proteins of known sequence

8 April 2023

18

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The influence of short-range interactions on protein onformation. II. A model for predicting the alpha-helical regions of proteins

8 April 2023

19

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Use of helical wheels to represent the structures of proteins and to identify segments with helical potential

8 April 2023

20

1 reference

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Theory of the Phase Transition between Helix and Random Coil in Polypeptide Chains

8 April 2023

23

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Helix probability profiles of denatured proteins and their correlation with native structures

8 April 2023

24

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Predictions of structural homologies in cytochrome c proteins

8 April 2023

25

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An attempt to locate the non-helical and permissively helical sequences of proteins: application to the variable regions of immunoglobulin light and heavy chains

8 April 2023

26

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An attempt to evaluate the influence of neighboring amino acids (n-1) and (n+1) on the backbone conformation of amino acid (n) in proteins. Use in predicting the three-dimensional structure of the polypeptide backbone of other proteins

8 April 2023

27

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Analysis of the code relating sequence to conformation in proteins: Possible implications for the mechanism of formation of helical regions

8 April 2023

28

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Statistical analysis of the correlation among amino acid residues in helical, beta-structural and non-regular regions of globular proteins

8 April 2023

29

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Structure of crystalline -chymotrypsin. V. The atomic structure of tosyl- -chymotrypsin at 2 A resolution

8 April 2023

33

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Three-dimensional Structure of Tosyl-elastase

8 April 2023

34

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The Covalent and Three-Dimensional Structure of Concanavalin A

8 April 2023

35

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Logical analysis of the mechanism of protein folding. I. Predictions of helices, loops and beta-structures from primary structure

8 April 2023

37

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The influence of nearest-neighboring amino acid residues on aspects of secondary structure of proteins. Attempts to locate ?-helices and ?-sheets

8 April 2023

38

1 reference

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The influence of nearest-neighbor amino acids on the conformation of the middle amino acid in proteins: comparison of predicted and experimental determination of -sheets in concanavalin A.

8 April 2023

39

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Conformational studies on copolymers of hydroxypropyl-L-glutamine and L-leucine. Circular dichroism studies

8 April 2023

40

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Structural and functional role of leucine residues in proteins

8 April 2023

41

1 reference

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Conformational parameters for amino acids in helical, beta-sheet, and random coil regions calculated from proteins

8 April 2023

42

1 reference

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Prediction of protein conformation

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43

1 reference

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Carboxypeptidase A: a protein and an enzyme.

8 April 2023

44

1 reference

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Three-dimensional structure of adenyl kinase

8 April 2023

46

1 reference

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Crystal structure of human carbonic anhydrase C

8 April 2023

47

1 reference

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Three-Dimensional Structure of Hemoglobin from the Polychaete Annelid, Glycera dibranchiata, at 2.5 A Resolution

8 April 2023

52

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The Atomic Structure of Erythrocruorin in the Light of the Chemical Sequence and its Comparison with Myoglobin

8 April 2023

53

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Atomic co-ordinates for dogfish M4 apo-lactate dehydrogenase

8 April 2023

54

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Sequence of rubredoxin by X-ray diffraction

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56

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IUPAC-IUB Commission on Biochemical Nomenclature. Abbreviations and symbols for the description of the conformation of polypeptide chains. Tentative rules (1969)

8 April 2023

57

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The structure of proteins; two hydrogen-bonded helical configurations of the polypeptide chain

8 April 2023

58

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Conformation of Polypeptides and Proteins

8 April 2023

59

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A Second Right-handed Helical Structure with the Parameters of the Pauling–Corey α-helix

8 April 2023

60

1 reference

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Folding of Polypeptide Chains in Proteins: A Proposed Mechanism for Folding

8 April 2023

61

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Protein folding

62

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The Reverse Turn as a Polypeptide Conformation in Globular Proteins

8 April 2023

63

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Stereochemical criteria for polypeptides and proteins. V. Conformation of a system of three linked peptide units

8 April 2023

65

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The relation between amino acid sequence and protein conformation

8 April 2023

67

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Statistical analysis of the distribution of amino acid residues among helical and non-helical regions in globular proteins

8 April 2023

68

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Structure of concanavalin A at 2.4-A resolution

8 April 2023

71

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Circular dichroism studies on concanavalin A

8 April 2023

72

1 reference

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Elastase. II. Optical properties and the effects of sodium dodecyl sulfate

8 April 2023

73

1 reference

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Prediction of alpha-helices in glucagon

8 April 2023

74

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Reply to "Prediction of a-Helices in Glucagon" by Schiffer and Edmundson

8 April 2023

75

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Conformation of glucagon. Predictions and consequences

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76

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The circular dichroism of glucagon solutions

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77

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Determination of the secondary structures of proteins by circular dichroism and optical rotatory dispersion

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78

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Conformational states of glucagon

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79

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Studies on the Conformation of Glucagon

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Evidence for the compact conformation of monomeric glucagon. Hydrogen-tritium exchange studies

8 April 2023

81

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Conformational nature of monomeric glucagon

8 April 2023

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X-ray analysis of glucagon and its relationship to receptor binding

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Isolation of the lac repressor

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84

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8 April 2023

Lac Repressor

85

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The Amino-Acid Sequence of lac Repressor

8 April 2023

87

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The Nucleotide Sequence of the lac Operator

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Altered Sequences Changing the Operator-Binding Properties of the Lac Repressor: Colinearity of the Repressor Protein with the i -Gene Map

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Conformational prediction and circular dichroism studies on the lac repressor

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Brookhaven symposia in biology

8 April 2023

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15

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Kendrew

1962

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A Proposed Model for Interaction of Polypeptides with RNA

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Repressors

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The lac Repressor Protein: Molecular Shape, Subunit Structure, and Proposed Model for Operator Interaction Based on Structural Studies of Microcrystals

8 April 2023

96

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Abnormal human haemoglobins. III. The chemical difference between normal and sickle cell haemoglobins

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97

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Structure of sickled erythrocytes and of sickle-cell hemoglobin fibers

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Structure of fibers of sickle cell hemoglobin

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Structure of Hemoglobin S Fibers: Optical Determination of the Molecular Orientation in Sickled Erythrocytes

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100

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Beta-sheet aggregation proposed in sickle cell hemoglobin.

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101

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A MOLECULAR MECHANISM OF SICKLED ERYTHROCYTE FORMATION

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102

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Three-dimensional Fourier Synthesis of Horse Oxyhaemoglobin at 2.8 Å Resolution: The Atomic Model

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103

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Crystal structure of sickle-cell deoxyhemoglobin at 5 A resolution.

8 April 2023

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The coenzyme-binding domains of glutamate dehydrogenases

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Chemical modifications of functional residues of fd gene 5 DNA-binding protein

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108

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A Prediction of the Structure of Tobacco-Mosaic-Virus Protein

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Analysis of the primary sequence of α-tropomyosin from rabbit skeletal muscle

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The primary structure of the 16 S rRNA binding protein S 8 from Escherichia coli ribosomes

8 April 2023

112

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The primary structure of protein S9 from the 30S subunit of Escherichia coli ribosomes

8 April 2023

113

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Primary structure of ribosomal protein S6 from the wild type and a mutant of Escherichia coli

8 April 2023

114

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The primary structure of the 5S RNA binding protein L18 from Escherichia coli ribosomes

8 April 2023

115

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The primary structure of protein L27 from the peptidyl‐tRNA binding site of Escherichia coli ribosomes

8 April 2023

116

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Primary structure of protein S18 from the small Escherichia coli ribosomal subunit

8 April 2023

117

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The primary structure of protein L30 from Escherichia coli ribosomes

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118

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The Primary Structure of the 5S rRNA Binding Protein L25 of Escherichia coli Ribosomes

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119

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Determination of the complete amino acid sequence of protein S21 from Escherichia coli ribosomes

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120

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Determination of the amino-acid sequence of the ribosomal protein S8 of Escherichia coli

8 April 2023

121

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Primary structure of protein S20 from the small ribosomal subunit of Escherichia coli

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122

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Primary structure of protein L33 from the large subunit of the Escherichia coli ribosome

8 April 2023

123

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Identifiers

OpenCitations bibliographic resource ID

0 references

276210

1 reference

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

276210

1 reference