(Q27936626)

16880382

1 December 2016

title

Identifying transcription factor functions and targets by phenotypic activation (English)

1 reference

PubMed

1 December 2016

1 reference

GOA release 2020-03-11

Esther T Chan

6

0 references

Mark D. Robinson

object named as

Mark D Robinson

4

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Quaid D Morris

object named as

Quaid D Morris

2

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Brendan J. Frey

7

object named as

Brendan J Frey

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author name string

Gordon Chua

1

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Richelle Sopko

3

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Owen Ryan

5

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Brenda J Andrews

8

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Charles Boone

9

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Timothy R Hughes

Proceedings of the National Academy of Sciences of the United States of America

10

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language of work or name

English

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publication date

8 August 2006

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published in

1 reference

PubMed

16880382

Mapping pathways and phenotypes by systematic gene overexpression

1 December 2016

volume

103

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issue

32

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page(s)

12045-50

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cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1567694

Evolutionarily conserved elements in vertebrate, insect, worm, and yeast genomes

20 March 2017

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Transcriptional regulatory code of a eukaryotic genome

20 March 2017

1 reference

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Exploration of essential gene functions via titratable promoter alleles

20 March 2017

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Defining transcriptional networks through integrative modeling of mRNA expression and transcription factor binding data

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1567694

Finding Functional Features in Saccharomyces Genomes by Phylogenetic Footprinting

20 March 2017

1 reference

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Sequencing and comparison of yeast species to identify genes and regulatory elements

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1567694

Upc2p and Ecm22p, dual regulators of sterol biosynthesis in Saccharomyces cerevisiae

20 March 2017

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Cloning of an alkaline ceramidase from Saccharomyces cerevisiae. An enzyme with reverse (CoA-independent) ceramide synthase activity

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1567694

Regulators of pseudohyphal differentiation in Saccharomyces cerevisiae identified through multicopy suppressor analysis in ammonium permease mutant strains

20 March 2017

1 reference

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Exploring the metabolic and genetic control of gene expression on a genomic scale

20 March 2017

1 reference

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Elements of a single MAP kinase cascade in Saccharomyces cerevisiae mediate two developmental programs in the same cell type: mating and invasive growth

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1567694

Cloning and sequencing of URA10, a second gene encoding orotate phosphoribosyl transferase in Saccharomyces cerevisiae

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1567694

Genome-wide location and function of DNA binding proteins

20 March 2017

1 reference

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Systematic determination of genetic network architecture

20 March 2017

1 reference

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Development of Saccharomyces cerevisiae as a model pathogen. A system for the genetic identification of gene products required for survival in the mammalian host environment

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1567694

An artificial transcription activator mimics the genome-wide properties of the yeast Pdr1 transcription factor

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1567694

Finding DNA regulatory motifs within unaligned noncoding sequences clustered by whole-genome mRNA quantitation

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1567694

TRANSFAC: transcriptional regulation, from patterns to profiles

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1567694

Genomic binding sites of the yeast cell-cycle transcription factors SBF and MBF

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1567694

Translational regulation of GCN4 and the general amino acid control of yeast

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1567694

Transcriptional profiling shows that Gcn4p is a master regulator of gene expression during amino acid starvation in yeast

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1567694

Expression profiling using microarrays fabricated by an ink-jet oligonucleotide synthesizer

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1567694

Signaling and circuitry of multiple MAPK pathways revealed by a matrix of global gene expression profiles

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1567694

Functional analysis of CaIPT1, a sphingolipid biosynthetic gene involved in multidrug resistance and morphogenesis of Candida albicans.

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1567694

Ectopic expression of Oct-4 blocks progenitor-cell differentiation and causes dysplasia in epithelial tissues

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1567694

DIP-chip: rapid and accurate determination of DNA-binding specificity.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1567694

Transcriptional networks: reverse-engineering gene regulation on a global scale

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1567694

Rapid analysis of the DNA-binding specificities of transcription factors with DNA microarrays.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1567694

Genome-wide analysis of mRNA stability using transcription inhibitors and microarrays reveals posttranscriptional control of ribosome biogenesis factors

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1567694

BioProspector: discovering conserved DNA motifs in upstream regulatory regions of co-expressed genes.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1567694

Characterization of alcohol-induced filamentous growth in Saccharomyces cerevisiae.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1567694

Effectors of a developmental mitogen-activated protein kinase cascade revealed by expression signatures of signaling mutants

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1567694

The yeast UASG is a transcriptional enhancer in human HeLa cells in the presence of the GAL4 trans-activator

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1567694

Pathogenicity of Candida albicans auxotrophic mutants in experimental infections.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1567694

Molecular and genetic analysis of URA5 transformants of Cryptococcus neoformans

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1567694

Ectopic Pax6 expression disturbs lens fiber cell differentiation.

29 September 2017

1 reference

Crossref

https://api.crossref.org/works/10.1073%2FPNAS.0605140103

Xenopus aristaless-related homeobox (xARX) gene product functions as both a transcriptional activator and repressor in forebrain development

21 January 2018

1 reference

Crossref

https://api.crossref.org/works/10.1073%2FPNAS.0605140103

Epistasis analysis with global transcriptional phenotypes

21 January 2018

1 reference

Crossref

https://api.crossref.org/works/10.1073%2FPNAS.0605140103

Mouse brain organization revealed through direct genome-scale TF expression analysis

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/16880382

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1073/PNAS.0605140103

1 reference

ADS bibcode

2006PNAS..10312045C

0 references

1 reference

1 reference

16880382

1 reference