(Q24649971)

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27 December 2019

title

YEASTRACT-DISCOVERER: new tools to improve the analysis of transcriptional regulatory associations in Saccharomyces cerevisiae (English)

1 reference

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27 December 2019

main subject

Saccharomyces cerevisiae

0 references

author

Pedro Monteiro

1

1 reference

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27 December 2019

Nuno D. Mendes

2

1 reference

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27 December 2019

Miguel C. Teixeira

3

1 reference

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27 December 2019

Sandra Tenreiro

5

1 reference

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27 December 2019

Nuno P Mira

6

1 reference

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27 December 2019

Helio Pais

7

1 reference

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27 December 2019

Alexandre P Francisco

8

1 reference

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27 December 2019

Alexandra M Carvalho

9

1 reference

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27 December 2019

Isabel Sa-Correia

11

1 reference

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27 December 2019

Arlindo L. Oliveira

12

1 reference

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27 December 2019

Ana T. Freitas

13

1 reference

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27 December 2019

10

Artur B Lourenço

1 reference

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27 December 2019

author name string

Sofia d'Orey

4

1 reference

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27 December 2019

language of work or name

English

0 references

publication date

21 November 2007

1 reference

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27 December 2019

published in

Nucleic Acids Research

1 reference

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27 December 2019

volume

36

1 reference

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27 December 2019

issue

Database issue

1 reference

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27 December 2019

page(s)

D132-6

1 reference

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The YEASTRACT database: a tool for the analysis of transcription regulatory associations in Saccharomyces cerevisiae

27 December 2019

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2238916

Gene ontology: tool for the unification of biology

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2238916

Transcriptional regulatory networks in Saccharomyces cerevisiae

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2238916

Identification of common molecular subsequences

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2238916

Identifying transcription factor functions and targets by phenotypic activation

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2238916

Transcriptional regulatory code of a eukaryotic genome

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2238916

Complex transcriptional circuitry at the G1/S transition in Saccharomyces cerevisiae

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2238916

Network motifs: simple building blocks of complex networks

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2238916

Transcription factor binding site identification in yeast: a comparison of high-density oligonucleotide and PCR-based microarray platforms

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2238916

MYBS: a comprehensive web server for mining transcription factor binding sites in yeast

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2238916

DNA familial binding profiles made easy: comparison of various motif alignment and clustering strategies

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2238916

A systems approach to mapping DNA damage response pathways

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2238916

Network motifs in integrated cellular networks of transcription-regulation and protein-protein interaction

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2238916

Regulatory sequence analysis tools

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2238916

The TRANSFAC system on gene expression regulation.

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2238916

POXO: a web-enabled tool series to discover transcription factor binding sites

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2238916

MUSA: a parameter free algorithm for the identification of biologically significant motifs.

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2238916

An efficient algorithm for the identification of structured motifs in DNA promoter sequences.

28 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2238916

Early transcriptional response of Saccharomyces cerevisiae to stress imposed by the herbicide 2,4-dichlorophenoxyacetic acid.

28 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2238916

28 November 2018

Identifiers

DOI

10.1093/NAR/GKM976

2 references

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18032429%20AND%20SRC:MED&resulttype=core&format=json

journals/nar/MonteiroMTdTMPFCLSOF08

27 December 2019

DBLP publication ID

1 reference

DBLP Dataset 2021-01-02

28 January 2021

1 reference

2 references

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18032429%20AND%20SRC:MED&resulttype=core&format=json

27 December 2019

PubMed publication ID

18032429

2 references