(Q24295238)

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CTCF binding at the H19 imprinting control region mediates maternally inherited higher-order chromatin conformation to restrict enhancer access to Igf2

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CTCF binding at the H19 imprinting control region mediates maternally inherited higher-order chromatin conformation to restrict enhancer access to Igf2 (English)

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CCCTC-binding factor

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GOA release 2020-03-11

regulation of molecular function

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GOA release 2020-03-11

8

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Victor V Lobanenkov

object named as

Victor Lobanenkov

7

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author name string

Sreenivasulu Kurukuti

1

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Vijay Kumar Tiwari

2

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Gholamreza Tavoosidana

3

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Elena Pugacheva

4

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Adele Murrell

5

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Zhihu Zhao

6

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Rolf Ohlsson

9

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language of work or name

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publication date

11 July 2006

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Proceedings of the National Academy of Sciences of the United States of America

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103

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28

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10684-9

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CTCF binding and higher order chromatin structure of the H19 locus are maintained in mitotic chromatin

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1484419

19 March 2017

CTCF tethers an insulator to subnuclear sites, suggesting shared insulator mechanisms across species

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1484419

19 March 2017

Looping and interaction between hypersensitive sites in the active beta-globin locus

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1484419

19 March 2017

Capturing chromosome conformation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1484419

19 March 2017

CTCF is a uniquely versatile transcription regulator linked to epigenetics and disease

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1484419

19 March 2017

CTCF mediates methylation-sensitive enhancer-blocking activity at the H19/Igf2 locus

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1484419

19 March 2017

Methylation of a CTCF-dependent boundary controls imprinted expression of the Igf2 gene

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1484419

19 March 2017

The protein CTCF is required for the enhancer blocking activity of vertebrate insulators

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1484419

19 March 2017

An enhancer deletion affects both H19 and Igf2 expression

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1484419

19 March 2017

Loss of silent-chromatin looping and impaired imprinting of DLX5 in Rett syndrome

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1484419

19 March 2017

Transgenic RNAi reveals essential function for CTCF in H19 gene imprinting

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1484419

19 March 2017

CTCF maintains differential methylation at the Igf2/H19 locus

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1484419

19 March 2017

Genomic imprinting: parental influence on the genome

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1484419

7 April 2017

Active genes dynamically colocalize to shared sites of ongoing transcription

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1484419

27 September 2017

The binding sites for the chromatin insulator protein CTCF map to DNA methylation-free domains genome-wide

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1484419

27 September 2017

Insulator dynamics and the setting of chromatin domains.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1484419

27 September 2017

Mutation of a single CTCF target site within the H19 imprinting control region leads to loss of Igf2 imprinting and complex patterns of de novo methylation upon maternal inheritance.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1484419

27 September 2017

Genomic imprinting: intricacies of epigenetic regulation in clusters.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1484419

27 September 2017

Spatial organization of gene expression: the active chromatin hub.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1484419

27 September 2017

The nucleotides responsible for the direct physical contact between the chromatin insulator protein CTCF and the H19 imprinting control region manifest parent of origin-specific long-distance insulation and methylation-free domains

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1484419

27 September 2017

The origins of genomic imprinting in mammals

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1484419

27 September 2017

An intragenic methylated region in the imprinted Igf2 gene augments transcription.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1484419

27 September 2017

Bisulfite genomic sequencing of microdissected cells

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1484419

27 September 2017

CpG methylation regulates the Igf2/H19 insulator

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1484419

27 September 2017

An upstream repressor element plays a role in Igf2 imprinting

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1484419

27 September 2017

Insulators and boundaries: versatile regulatory elements in the eukaryotic genome

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1484419

27 September 2017

A transcriptional insulator at the imprinted H19/Igf2 locus

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1484419

27 September 2017

Negative transcriptional regulation mediated by thyroid hormone response element 144 requires binding of the multivalent factor CTCF to a novel target DNA sequence

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1484419

27 September 2017

Deletion of the H19 differentially methylated domain results in loss of imprinted expression of H19 and Igf2.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1484419

27 September 2017

An enhancer element at the Igf2/H19 locus drives gene expression in both imprinted and non-imprinted tissues.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1484419

30 May 2018

Disruption of mesodermal enhancers for Igf2 in the minute mutant.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1484419

30 May 2018

Altered imprinted gene methylation and expression in completely ES cell-derived mouse fetuses: association with aberrant phenotypes.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1484419

30 May 2018

Deletion of a silencer element in Igf2 results in loss of imprinting independent of H19.

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0600326103

21 January 2018

CTCF elements direct allele-specific undermethylation at the imprinted H19 locus

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0600326103

21 January 2018

Epigenetic modifications in an imprinting cluster are controlled by a hierarchy of DMRs suggesting long-range chromatin interactions.

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0600326103

21 January 2018

Interaction between differentially methylated regions partitions the imprinted genes Igf2 and H19 into parent-specific chromatin loops

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0600326103

21 January 2018

Appropriate expression of the mouse H19 gene utilises three or more distinct enhancer regions spread over more than 130 kb.

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0600326103

21 January 2018

The three 'C' s of chromosome conformation capture: controls, controls, controls.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1484419

29 November 2018

Novel conserved elements upstream of the H19 gene are transcribed and act as mesodermal enhancers

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1484419

29 November 2018

Imprinting of Igf2 and H19 from a 130 kb YAC transgene.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1484419

29 November 2018

Functional association of CTCF with the insulator upstream of the H19 gene is parent of origin-specific and methylation-sensitive

1 reference

https://pubmed.ncbi.nlm.nih.gov/16815976

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Hot-stop PCR: a simple and general assay for linear quantitation of allele ratios

1 reference

https://pubmed.ncbi.nlm.nih.gov/16815976

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Did genomic imprinting and X chromosome inactivation arise from stochastic expression?

1 reference

https://pubmed.ncbi.nlm.nih.gov/16815976

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1073/PNAS.0600326103

1 reference

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

2006PNAS..10310684K

0 references

OpenCitations bibliographic resource ID

1 reference

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

PMC publication ID

1 reference

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

PubMed publication ID

1 reference

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

ResearchGate publication ID

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