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The RNA cleavage activity of RNA polymerase III is mediated by an essential TFIIS-like subunit and is important for transcription termination

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7 December 2019

The RNA cleavage activity of RNA polymerase III is mediated by an essential TFIIS-like subunit and is important for transcription termination (English)

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7 December 2019

RNA polymerase III subunit K

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GOA release 2020-03-11

transcription by RNA polymerase III

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GOA release 2020-03-11

DNA-directed RNA polymerase III core subunit RPC11 YDR045C

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GOA release 2020-03-11

Patrick Schultz

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7 December 2019

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7 December 2019

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7 December 2019

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7 December 2019

C Carles

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7 December 2019

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7 December 2019

Genes & Development

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7 December 2019

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7 December 2019

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7 December 2019

3857-3871

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7 December 2019

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11 June 2022

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Trajectory of DNA in the RNA polymerase II transcription preinitiation complex

1 reference

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19 March 2017

Factor requirements for transcription in the Archaeon Sulfolobus shibatae

1 reference

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19 March 2017

Four Subunits That Are Shared by the Three Classes of RNA Polymerase Are Functionally Interchangeable between Homo sapiens and Saccharomyces cerevisiae

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=317263

19 March 2017

Crystal structure of a bacteriophage T7 DNA replication complex at 2.2 A resolution

1 reference

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19 March 2017

Complete Genome Sequence of the Methanogenic Archaeon, Methanococcus jannaschii

1 reference

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19 March 2017

Cleavage of Structural Proteins during the Assembly of the Head of Bacteriophage T4

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=317263

19 March 2017

A system of shuttle vectors and yeast host strains designed for efficient manipulation of DNA in Saccharomyces cerevisiae

1 reference

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19 March 2017

Transcription elongation through DNA arrest sites. A multistep process involving both RNA polymerase II subunit RPB9 and TFIIS.

1 reference

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19 March 2017

Gene RRN4 in Saccharomyces cerevisiae encodes the A12.2 subunit of RNA polymerase I and is essential only at high temperatures

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=317263

19 March 2017

Role of a small RNA pol II subunit in TATA to transcription start site spacing

1 reference

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19 March 2017

ret1-1, a yeast mutant affecting transcription termination by RNA polymerase III

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=317263

19 March 2017

A simple and efficient method for direct gene deletion in Saccharomyces cerevisiae

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=317263

19 March 2017

Regulatable promoters of Saccharomyces cerevisiae: comparison of transcriptional activity and their use for heterologous expression

1 reference

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19 March 2017

Spliceosomal RNA U6 is remarkably conserved from yeast to mammals

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=317263

19 March 2017

Spliceosomal snRNAs

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=317263

19 March 2017

Transcription elongation factor SII (TFIIS) enables RNA polymerase II to elongate through a block to transcription in a human gene in vitro

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=317263

19 March 2017

The sequence, and its evolutionary implications, of a Thermococcus celer protein associated with transcription

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=317263

19 March 2017

Rapid and sensitive sequence comparison with FASTP and FASTA

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=317263

7 April 2017

Fidelity of RNA polymerase II transcription controlled by elongation factor TFIIS.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=317263

12 September 2017

A novel RNA polymerase I-dependent RNase activity that shortens nascent transcripts from the 3' end.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=317263

12 September 2017

In vitro analysis of elongation and termination by mutant RNA polymerases with altered termination behavior

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=317263

12 September 2017

Localization of yeast RNA polymerase I core subunits by immunoelectron microscopy

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=317263

12 September 2017

The RNA polymerase II general elongation factors

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=317263

12 September 2017

The increment of SII-facilitated transcript cleavage varies dramatically between elongation competent and incompetent RNA polymerase II ternary complexes.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=317263

12 September 2017

The transcription factor TFIIS zinc ribbon dipeptide Asp-Glu is critical for stimulation of elongation and RNA cleavage by RNA polymerase II.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=317263

12 September 2017

Termination-altering mutations in the second-largest subunit of yeast RNA polymerase III.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=317263

12 September 2017

Identification of a decay in transcription potential that results in elongation factor dependence of RNA polymerase II.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=317263

12 September 2017

The human dystrophin gene requires 16 hours to be transcribed and is cotranscriptionally spliced

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=317263

12 September 2017

Transcription in archaea: similarity to that in eucarya

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=317263

12 September 2017

Effects of alterations in the 3' flanking sequence on in vivo and in vitro expression of the yeast SUP4-o tRNATyr gene

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=317263

12 September 2017

Dynamic interaction between a Drosophila transcription factor and RNA polymerase II.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=317263

12 September 2017

The U6 gene of Saccharomyces cerevisiae is transcribed by RNA polymerase C (III) in vivo and in vitro

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=317263

12 September 2017

In vitro analysis of a transcription termination site for RNA polymerase II.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=317263

12 September 2017

Transcription elongation and eukaryotic gene regulation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=317263

12 September 2017

Analysis of the signals for transcription termination by purified RNA polymerase II.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=317263

12 September 2017

RNA polymerase: regulation of transcript elongation and termination

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=317263

12 September 2017

Spontaneous cleavage of RNA in ternary complexes of Escherichia coli RNA polymerase and its significance for the mechanism of transcription

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=317263

12 September 2017

The RNA polymerase II 15-kilodalton subunit is essential for viability in Drosophila melanogaster

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=317263

12 September 2017

GreA protein: a transcription elongation factor from Escherichia coli

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=317263

12 September 2017

RNA polymerase III and class III transcription factors from Saccharomyces cerevisiae

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=317263

27 September 2017

Mutations in the alpha-amanitin conserved domain of the largest subunit of yeast RNA polymerase III affect pausing, RNA cleavage and transcriptional transitions.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=317263

27 September 2017

Putative tfIIs gene of Sulfolobus acidocaldarius encoding an archaeal transcription elongation factor is situated directly downstream of the gene for a small subunit of DNA-dependent RNA polymerase

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=317263

27 September 2017

Three-dimensional model of yeast RNA polymerase I determined by electron microscopy of two-dimensional crystals

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=317263

27 September 2017

Eukaryotic RNA polymerases

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=317263

27 September 2017

Probing yeast RNA polymerase A subunits with monospecific antibodies

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=317263

27 September 2017

Transcriptional fidelity and proofreading by RNA polymerase II.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=317263

30 May 2018

Basic mechanisms of transcript elongation and its regulation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=317263

30 May 2018

Transcriptional termination signals for RNA polymerase II in fission yeast

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=317263

30 May 2018

Analysis of RNA chain elongation and termination by Saccharomyces cerevisiae RNA polymerase III.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=317263

30 May 2018

Mapping and characterization of transcriptional pause sites in the early genetic region of bacteriophage T7.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=317263

30 May 2018

Properties of a Drosophila RNA polymerase II elongation factor.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=317263

30 May 2018

Three-dimensional structure of Escherichia coli RNA polymerase holoenzyme determined by electron crystallography

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=317263

30 May 2018

Purified elongation factor SII is sufficient to promote read-through by purified RNA polymerase II at specific termination sites in the human histone H3.3 gene

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=317263

30 May 2018

Three-dimensional structure of yeast RNA polymerase II at 16 A resolution

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=317263

30 May 2018

Yeast RNA polymerase II subunit RPB9 is essential for growth at temperature extremes.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=317263

30 May 2018

Two conformations of RNA polymerase II revealed by electron crystallography.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=317263

29 November 2018

Transcript cleavage in an RNA polymerase I elongation complex. Evidence for a dissociable activity similar to but distinct from TFIIS.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=317263

29 November 2018

Three-dimensional structure of E. coli core RNA polymerase: promoter binding and elongation conformations of the enzyme.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=317263

29 November 2018

Transcript cleavage factors from E. coli.

1 reference

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29 November 2018

The thumb's knuckle. Flexibility in the thumb subdomain of T7 RNA polymerase is revealed by the structure of a chimeric T7/T3 RNA polymerase

1 reference

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29 November 2018

Alanine-Scanning Mutagenesis of Human Transcript Elongation Factor TFIIS

1 reference

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29 November 2018

Hydrolytic cleavage of nascent RNA in RNA polymerase III ternary transcription complexes.

1 reference

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29 November 2018

Immunological studies of yeast nuclear RNA polymerases at the subunit level

1 reference

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29 November 2018

Mechanistic studies of transcription arrest at the adenovirus major late attenuation site. Comparison of purified RNA polymerase II and washed elongation complexes

1 reference

https://pubmed.ncbi.nlm.nih.gov/9869639

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

6-Azauracil inhibition of GTP biosynthesis in Saccharomyces cerevisiae

1 reference

https://pubmed.ncbi.nlm.nih.gov/9869639

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Factor-stimulated RNA polymerase II transcribes at physiological elongation rates on naked DNA but very poorly on chromatin templates

1 reference

https://pubmed.ncbi.nlm.nih.gov/9869639

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Tagetitoxin inhibition of RNA polymerase III transcription results from enhanced pausing at discrete sites and is template-dependent

1 reference

https://pubmed.ncbi.nlm.nih.gov/9869639

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Nascent RNA cleavage by purified ternary complexes of vaccinia RNA polymerase

1 reference

https://pubmed.ncbi.nlm.nih.gov/9869639

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Multiple RNA polymerase conformations and GreA: control of the fidelity of transcription

1 reference

https://pubmed.ncbi.nlm.nih.gov/9869639

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Drosophila RNA polymerase II mutants that affect transcription elongation

1 reference

https://pubmed.ncbi.nlm.nih.gov/9869639

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Substrate specificity of the RNase activity of yeast RNA polymerase III

1 reference

https://pubmed.ncbi.nlm.nih.gov/9869639

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

RNA polymerase II subunit RPB9 is required for accurate start site selection

1 reference

https://pubmed.ncbi.nlm.nih.gov/9869639

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Facilitated recycling pathway for RNA polymerase III

1 reference

https://pubmed.ncbi.nlm.nih.gov/9869639

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1101/GAD.12.24.3857

2 references

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

Europe PubMed Central

PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:9869639%20AND%20SRC:MED&resulttype=core&format=json

7 December 2019

OpenCitations bibliographic resource ID

1 reference

Consolidated OpenCitations Corpus – April 2017

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PMC publication ID

2 references

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

Europe PubMed Central

PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:9869639%20AND%20SRC:MED&resulttype=core&format=json

7 December 2019

PubMed publication ID

2 references

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

Europe PubMed Central

PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:9869639%20AND%20SRC:MED&resulttype=core&format=json

7 December 2019

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