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@OHSU-Proteomics

OHSU Proteomics Core

Oregon Health & Science University Proteomics Core resources

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  1. Start_Here Start_Here Public

    Roadmap to OHSU-Proteomics repositories (links and descriptions).

  2. basic_proteomics_workflows basic_proteomics_workflows Public

    A walk through of basic proteomics workflows in use at the OHSU PSR core.

  3. TMT_overview_2020 TMT_overview_2020 Public

    General overview of performing tandem mass tags (TMT) quantitative proteomics experiments.

    1

  4. PRIDE_submission_tutorial PRIDE_submission_tutorial Public

    A lighthearted guide to submitting proteomics data to PRIDE.

  5. Gene-set-enrichment_STRING-DB Gene-set-enrichment_STRING-DB Public

    Using STRING-DB to do gene set enrichment analyses

    2

  6. OHSU_TMT_Publications OHSU_TMT_Publications Public

    List of publications where TMT labeling was used in the OHSU PSR core.

    1

Repositories

Showing 10 of 12 repositories
  • OHSU_TMT_Publications Public

    List of publications where TMT labeling was used in the OHSU PSR core.

    OHSU-Proteomics/OHSU_TMT_Publications’s past year of commit activity
    0 MIT 1 0 0 Updated Sep 12, 2021
  • Start_Here Public

    Roadmap to OHSU-Proteomics repositories (links and descriptions).

    OHSU-Proteomics/Start_Here’s past year of commit activity
    0 MIT 0 0 0 Updated Sep 3, 2021
  • Gene-set-enrichment_STRING-DB Public

    Using STRING-DB to do gene set enrichment analyses

    OHSU-Proteomics/Gene-set-enrichment_STRING-DB’s past year of commit activity
    2 MIT 0 0 0 Updated Sep 3, 2021
  • working-with-PAW-results-files Public

    Guide to understanding and working with PAW pipeline results files.

    OHSU-Proteomics/working-with-PAW-results-files’s past year of commit activity
    0 MIT 0 0 0 Updated Aug 29, 2021
  • basic_proteomics_workflows Public

    A walk through of basic proteomics workflows in use at the OHSU PSR core.

    OHSU-Proteomics/basic_proteomics_workflows’s past year of commit activity
    0 MIT 0 0 0 Updated May 8, 2021
  • Data_Analysis_Overview Public

    An overview of common data analysis methods used by PSR.

    OHSU-Proteomics/Data_Analysis_Overview’s past year of commit activity
    0 MIT 0 0 0 Updated Oct 11, 2020
  • PRIDE_submission_tutorial Public

    A lighthearted guide to submitting proteomics data to PRIDE.

    OHSU-Proteomics/PRIDE_submission_tutorial’s past year of commit activity
    0 MIT 0 0 0 Updated Jul 8, 2020
  • squirrel_platelets_TMT_2020 Public

    Description of a TMT study of hibernating squirrel platelet samples performed at the OHSU PSR

    OHSU-Proteomics/squirrel_platelets_TMT_2020’s past year of commit activity
    1 MIT 0 0 0 Updated Jun 28, 2020
  • Eclipse_to_Fusion_comparison Public

    A comparison of one sample on a Thermo Fusion to a new Thermo Eclipse (with RTS in the mix).

    OHSU-Proteomics/Eclipse_to_Fusion_comparison’s past year of commit activity
    0 MIT 0 0 0 Updated May 25, 2020
  • Velos_Pro_Use Public

    Capabilities and how to use the Velos Pro linear ion trap.

    OHSU-Proteomics/Velos_Pro_Use’s past year of commit activity
    0 MIT 0 0 0 Updated May 12, 2020

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