SSBP1: Difference between revisions

SSBP1
Available structures
PDB	Ortholog search: PDBe RCSB
List of PDB id codes
	1S3O, 2DUD, 3ULL
Identifiers
Aliases	SSBP1, Mt-SSB, SOSS-B1, SSBP, mtSSB, single stranded DNA binding protein 1, OPA13
External IDs	OMIM: 600439; MGI: 1920040; HomoloGene: 74462; GeneCards: SSBP1; OMA:SSBP1 - orthologs
Gene location (Human)
Chr.	Chromosome 7 (human)
End	141,787,922 bp
Gene location (Mouse)
Chr.	Chromosome 6 (mouse)
End	40,461,634 bp
RNA expression pattern
	Top expressed in
	Achilles tendon; ; endometrium; ; islet of Langerhans; ; smooth muscle tissue; ; corpus callosum; ; rectum; ; monocyte; ; lymph node; ; appendix; ; gastric mucosa;
	Top expressed in
	embryo; ; embryo; ; ventricular zone; ; blastocyst; ; morula; ; tail of embryo; ; right kidney; ; yolk sac; ; genital tubercle; ; muscle of thigh;
	More reference expression data
	More reference expression data
Gene ontology
Molecular function	DNA binding; single-stranded DNA binding; chromatin binding; protein binding; RNA binding;
Cellular component	mitochondrial matrix; mitochondrial nucleoid; extracellular exosome; mitochondrion; nucleus; nucleoid;
Biological process	DNA replication; mitochondrion organization; mitochondrion morphogenesis; positive regulation of helicase activity; mitochondrial DNA replication;
	Sources:Amigo / QuickGO
Orthologs
	6742
	381760
	ENSG00000262771; ENSG00000106028
	ENSMUSG00000029911
	Q04837
	Q9CYR0
	NM_001256510; NM_001256511; NM_001256512; NM_001256513; NM_003143
	NM_001286663; NM_028358; NM_212468; NM_001364578
	NP_001243439; NP_001243440; NP_001243441; NP_001243442; NP_003134
	NP_001273592; NP_082634; NP_997633; NP_001351507
	Wikidata
View/Edit Human	View/Edit Mouse

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Revision as of 14:59, 23 January 2019

Single-stranded DNA-binding protein, mitochondrial is a protein that in humans is encoded by the SSBP1 gene.^[5]^[6]

Function

SSBP 1 is a housekeeping gene involved in mitochondrial biogenesis (Tiranti et al., 1995).[supplied by OMIM]^[6]

References

^ ^a ^b ^c ENSG00000106028 GRCh38: Ensembl release 89: ENSG00000262771, ENSG00000106028 – Ensembl, May 2017
^ ^a ^b ^c GRCm38: Ensembl release 89: ENSMUSG00000029911 – Ensembl, May 2017
^ "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
^ "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
^ Tiranti V, Rossi E, Ruiz-Carrillo A, Rossi G, Rocchi M, DiDonato S, Zuffardi O, Zeviani M (January 1995). "Chromosomal localization of mitochondrial transcription factor A (TCF6), single-stranded DNA-binding protein (SSBP), and endonuclease G (ENDOG), three human housekeeping genes involved in mitochondrial biogenesis". Genomics. 25 (2): 559–64. doi:10.1016/0888-7543(95)80058-T. PMID 7789991.
^ ^a ^b "Entrez Gene: SSBP1 single-stranded DNA binding protein 1".

Tiranti V, Rocchi M, DiDonato S, Zeviani M (April 1993). "Cloning of human and rat cDNAs encoding the mitochondrial single-stranded DNA-binding protein (SSB)". Gene. 126 (2): 219–25. doi:10.1016/0378-1119(93)90370-I. PMID 8482537.
Yang C, Curth U, Urbanke C, Kang C (February 1997). "Crystal structure of human mitochondrial single-stranded DNA binding protein at 2.4 A resolution". Nature Structural Biology. 4 (2): 153–7. doi:10.1038/nsb0297-153. PMID 9033597.
Schultz RA, Swoap SJ, McDaniel LD, Zhang B, Koon EC, Garry DJ, Li K, Williams RS (February 1998). "Differential expression of mitochondrial DNA replication factors in mammalian tissues". The Journal of Biological Chemistry. 273 (6): 3447–51. doi:10.1074/jbc.273.6.3447. PMID 9452467.{{cite journal}}: CS1 maint: unflagged free DOI (link)
Spelbrink JN, Toivonen JM, Hakkaart GA, Kurkela JM, Cooper HM, Lehtinen SK, Lecrenier N, Back JW, Speijer D, Foury F, Jacobs HT (August 2000). "In vivo functional analysis of the human mitochondrial DNA polymerase POLG expressed in cultured human cells". The Journal of Biological Chemistry. 275 (32): 24818–28. doi:10.1074/jbc.M000559200. PMID 10827171.{{cite journal}}: CS1 maint: unflagged free DOI (link)
Müller-Höcker J, Schäfer S, Li K (September 2001). "Immunocytochemical localization of mitochondrial single-stranded DNA-binding protein in mitochondria-rich cells of normal and neoplastic human tissue". Applied Immunohistochemistry & Molecular Morphology. 9 (3): 276–80. doi:10.1097/00022744-200109000-00013. PMID 11556757.
Takamatsu C, Umeda S, Ohsato T, Ohno T, Abe Y, Fukuoh A, Shinagawa H, Hamasaki N, Kang D (May 2002). "Regulation of mitochondrial D-loops by transcription factor A and single-stranded DNA-binding protein". EMBO Reports. 3 (5): 451–6. doi:10.1093/embo-reports/kvf099. PMC 1084112. PMID 11964388.
Chen L, Segal D, Hukriede NA, Podtelejnikov AV, Bayarsaihan D, Kennison JA, Ogryzko VV, Dawid IB, Westphal H (October 2002). "Ssdp proteins interact with the LIM-domain-binding protein Ldb1 to regulate development". Proceedings of the National Academy of Sciences of the United States of America. 99 (22): 14320–5. doi:10.1073/pnas.212532399. PMC 137882. PMID 12381786.
Diez-Tascón C, Dodds KG, Crawford AM (December 2002). "Linkage mapping of the ovine single-stranded DNA-binding protein 1 (SSBP1) using microsatellite marker OARCDT7". Animal Genetics. 33 (6): 468. doi:10.1046/j.1365-2052.2002.00938_1.x. PMID 12464025.
Bayarsaihan D (September 2002). "SSDP1 gene encodes a protein with a conserved N-terminal FORWARD domain". Biochimica et Biophysica Acta. 1599 (1–2): 152–5. doi:10.1016/s1570-9639(02)00376-x. PMID 12479417.
Pocernich CB, Poon HF, Boyd-Kimball D, Lynn BC, Nath A, Klein JB, Butterfield DA (February 2005). "Proteomic analysis of oxidatively modified proteins induced by the mitochondrial toxin 3-nitropropionic acid in human astrocytes expressing the HIV protein tat". Brain Research. Molecular Brain Research. 133 (2): 299–306. doi:10.1016/j.molbrainres.2004.10.024. PMID 15710247.

This article on a gene on human chromosome 7 is a stub. You can help Wikipedia by expanding it.

[refGRCh38Ensembl-1] ENSG00000106028 GRCh38: Ensembl release 89: ENSG00000262771, ENSG00000106028 – Ensembl, May 2017

[refGRCm38Ensembl-2] GRCm38: Ensembl release 89: ENSMUSG00000029911 – Ensembl, May 2017

[3] "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.

[4] "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.

[pmid7789991-5] Tiranti V, Rossi E, Ruiz-Carrillo A, Rossi G, Rocchi M, DiDonato S, Zuffardi O, Zeviani M (January 1995). "Chromosomal localization of mitochondrial transcription factor A (TCF6), single-stranded DNA-binding protein (SSBP), and endonuclease G (ENDOG), three human housekeeping genes involved in mitochondrial biogenesis". Genomics. 25 (2): 559–64. doi:10.1016/0888-7543(95)80058-T. PMID 7789991.

[entrez-6] "Entrez Gene: SSBP1 single-stranded DNA binding protein 1".

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@@ Line 5: / Line 5: @@
 SSBP 1 is a housekeeping gene involved in mitochondrial biogenesis (Tiranti et al., 1995).[supplied by OMIM]<ref name="entrez" />
+==See also==
+*[[SSBP4]]
 == References ==

Revision as of 14:59, 23 January 2019

Function

See also

References

Further reading