SSBP1: Difference between revisions

SSBP1
Available structures
PDB	Ortholog search: PDBe RCSB
List of PDB id codes
	1S3O, 2DUD, 3ULL
Identifiers
Aliases	SSBP1, Mt-SSB, SOSS-B1, SSBP, mtSSB, single stranded DNA binding protein 1, OPA13
External IDs	OMIM: 600439; MGI: 1920040; HomoloGene: 74462; GeneCards: SSBP1; OMA:SSBP1 - orthologs
Gene location (Human)
Chr.	Chromosome 7 (human)
End	141,787,922 bp
Gene location (Mouse)
Chr.	Chromosome 6 (mouse)
End	40,461,634 bp
RNA expression pattern
	Top expressed in
	Achilles tendon; ; endometrium; ; islet of Langerhans; ; smooth muscle tissue; ; corpus callosum; ; rectum; ; monocyte; ; lymph node; ; appendix; ; gastric mucosa;
	Top expressed in
	embryo; ; embryo; ; ventricular zone; ; blastocyst; ; morula; ; tail of embryo; ; right kidney; ; yolk sac; ; genital tubercle; ; muscle of thigh;
	More reference expression data
	More reference expression data
Gene ontology
Molecular function	DNA binding; single-stranded DNA binding; chromatin binding; protein binding; RNA binding;
Cellular component	mitochondrial matrix; mitochondrial nucleoid; extracellular exosome; mitochondrion; nucleus; nucleoid;
Biological process	DNA replication; mitochondrion organization; mitochondrion morphogenesis; positive regulation of helicase activity; mitochondrial DNA replication;
	Sources:Amigo / QuickGO
Orthologs
	6742
	381760
	ENSG00000262771; ENSG00000106028
	ENSMUSG00000029911
	Q04837
	Q9CYR0
	NM_001256510; NM_001256511; NM_001256512; NM_001256513; NM_003143
	NM_001286663; NM_028358; NM_212468; NM_001364578
	NP_001243439; NP_001243440; NP_001243441; NP_001243442; NP_003134
	NP_001273592; NP_082634; NP_997633; NP_001351507
	Wikidata
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Revision as of 10:29, 11 June 2008

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Single-stranded DNA binding protein 1, also known as SSBP1, is a human gene.^[5]

Template:PBB Summary

References

^ ^a ^b ^c ENSG00000106028 GRCh38: Ensembl release 89: ENSG00000262771, ENSG00000106028 – Ensembl, May 2017
^ ^a ^b ^c GRCm38: Ensembl release 89: ENSMUSG00000029911 – Ensembl, May 2017
^ "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
^ "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
^ "Entrez Gene: SSBP1 single-stranded DNA binding protein 1".

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 {{PBB_Further_reading
 | citations =
-*{{cite journal  | author=Tiranti V, Rossi E, Ruiz-Carrillo A, ''et al.'' |title=Chromosomal localization of mitochondrial transcription factor A (TCF6), single-stranded DNA-binding protein (SSBP), and endonuclease G (ENDOG), three human housekeeping genes involved in mitochondrial biogenesis. |journal=Genomics |volume=25 |issue= 2 |pages= 559-64 |year= 1995 |pmid= 7789991 |doi=  }}
+*{{cite journal  | author=Tiranti V, Rossi E, Ruiz-Carrillo A, ''et al.'' |title=Chromosomal localization of mitochondrial transcription factor A (TCF6), single-stranded DNA-binding protein (SSBP), and endonuclease G (ENDOG), three human housekeeping genes involved in mitochondrial biogenesis. |journal=Genomics |volume=25 |issue= 2 |pages= 559–64 |year= 1995 |pmid= 7789991 |doi=  }}
-*{{cite journal  | author=Tiranti V, Rocchi M, DiDonato S, Zeviani M |title=Cloning of human and rat cDNAs encoding the mitochondrial single-stranded DNA-binding protein (SSB). |journal=Gene |volume=126 |issue= 2 |pages= 219-25 |year= 1993 |pmid= 8482537 |doi=  }}
+*{{cite journal  | author=Tiranti V, Rocchi M, DiDonato S, Zeviani M |title=Cloning of human and rat cDNAs encoding the mitochondrial single-stranded DNA-binding protein (SSB). |journal=Gene |volume=126 |issue= 2 |pages= 219–25 |year= 1993 |pmid= 8482537 |doi=  }}
-*{{cite journal  | author=Yang C, Curth U, Urbanke C, Kang C |title=Crystal structure of human mitochondrial single-stranded DNA binding protein at 2.4 A resolution. |journal=Nat. Struct. Biol. |volume=4 |issue= 2 |pages= 153-7 |year= 1997 |pmid= 9033597 |doi=  }}
+*{{cite journal  | author=Yang C, Curth U, Urbanke C, Kang C |title=Crystal structure of human mitochondrial single-stranded DNA binding protein at 2.4 A resolution. |journal=Nat. Struct. Biol. |volume=4 |issue= 2 |pages= 153–7 |year= 1997 |pmid= 9033597 |doi=  }}
-*{{cite journal  | author=Schultz RA, Swoap SJ, McDaniel LD, ''et al.'' |title=Differential expression of mitochondrial DNA replication factors in mammalian tissues. |journal=J. Biol. Chem. |volume=273 |issue= 6 |pages= 3447-51 |year= 1998 |pmid= 9452467 |doi=  }}
+*{{cite journal  | author=Schultz RA, Swoap SJ, McDaniel LD, ''et al.'' |title=Differential expression of mitochondrial DNA replication factors in mammalian tissues. |journal=J. Biol. Chem. |volume=273 |issue= 6 |pages= 3447–51 |year= 1998 |pmid= 9452467 |doi=  }}
-*{{cite journal  | author=Spelbrink JN, Toivonen JM, Hakkaart GA, ''et al.'' |title=In vivo functional analysis of the human mitochondrial DNA polymerase POLG expressed in cultured human cells. |journal=J. Biol. Chem. |volume=275 |issue= 32 |pages= 24818-28 |year= 2000 |pmid= 10827171 |doi= 10.1074/jbc.M000559200 }}
+*{{cite journal  | author=Spelbrink JN, Toivonen JM, Hakkaart GA, ''et al.'' |title=In vivo functional analysis of the human mitochondrial DNA polymerase POLG expressed in cultured human cells. |journal=J. Biol. Chem. |volume=275 |issue= 32 |pages= 24818–28 |year= 2000 |pmid= 10827171 |doi= 10.1074/jbc.M000559200 }}
-*{{cite journal  | author=Müller-Höcker J, Schäfer S, Li K |title=Immunocytochemical localization of mitochondrial single-stranded DNA-binding protein in mitochondria-rich cells of normal and neoplastic human tissue. |journal=Appl. Immunohistochem. Mol. Morphol. |volume=9 |issue= 3 |pages= 276-80 |year= 2002 |pmid= 11556757 |doi=  }}
+*{{cite journal  | author=Müller-Höcker J, Schäfer S, Li K |title=Immunocytochemical localization of mitochondrial single-stranded DNA-binding protein in mitochondria-rich cells of normal and neoplastic human tissue. |journal=Appl. Immunohistochem. Mol. Morphol. |volume=9 |issue= 3 |pages= 276–80 |year= 2002 |pmid= 11556757 |doi=  }}
-*{{cite journal  | author=Takamatsu C, Umeda S, Ohsato T, ''et al.'' |title=Regulation of mitochondrial D-loops by transcription factor A and single-stranded DNA-binding protein. |journal=EMBO Rep. |volume=3 |issue= 5 |pages= 451-6 |year= 2002 |pmid= 11964388 |doi= 10.1093/embo-reports/kvf099 }}
+*{{cite journal  | author=Takamatsu C, Umeda S, Ohsato T, ''et al.'' |title=Regulation of mitochondrial D-loops by transcription factor A and single-stranded DNA-binding protein. |journal=EMBO Rep. |volume=3 |issue= 5 |pages= 451–6 |year= 2002 |pmid= 11964388 |doi= 10.1093/embo-reports/kvf099 }}
-*{{cite journal  | author=Chen L, Segal D, Hukriede NA, ''et al.'' |title=Ssdp proteins interact with the LIM-domain-binding protein Ldb1 to regulate development. |journal=Proc. Natl. Acad. Sci. U.S.A. |volume=99 |issue= 22 |pages= 14320-5 |year= 2002 |pmid= 12381786 |doi= 10.1073/pnas.212532399 }}
+*{{cite journal  | author=Chen L, Segal D, Hukriede NA, ''et al.'' |title=Ssdp proteins interact with the LIM-domain-binding protein Ldb1 to regulate development. |journal=Proc. Natl. Acad. Sci. U.S.A. |volume=99 |issue= 22 |pages= 14320–5 |year= 2002 |pmid= 12381786 |doi= 10.1073/pnas.212532399 }}
 *{{cite journal  | author=Diez-Tascón C, Dodds KG, Crawford AM |title=Linkage mapping of the ovine single-stranded DNA-binding protein 1 (SSBP1) using microsatellite marker OARCDT7. |journal=Anim. Genet. |volume=33 |issue= 6 |pages= 468 |year= 2003 |pmid= 12464025 |doi=  }}
-*{{cite journal  | author=Strausberg RL, Feingold EA, Grouse LH, ''et al.'' |title=Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. |journal=Proc. Natl. Acad. Sci. U.S.A. |volume=99 |issue= 26 |pages= 16899-903 |year= 2003 |pmid= 12477932 |doi= 10.1073/pnas.242603899 }}
+*{{cite journal  | author=Strausberg RL, Feingold EA, Grouse LH, ''et al.'' |title=Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. |journal=Proc. Natl. Acad. Sci. U.S.A. |volume=99 |issue= 26 |pages= 16899–903 |year= 2003 |pmid= 12477932 |doi= 10.1073/pnas.242603899 }}
-*{{cite journal  | author=Bayarsaihan D |title=SSDP1 gene encodes a protein with a conserved N-terminal FORWARD domain. |journal=Biochim. Biophys. Acta |volume=1599 |issue= 1-2 |pages= 152-5 |year= 2003 |pmid= 12479417 |doi=  }}
+*{{cite journal  | author=Bayarsaihan D |title=SSDP1 gene encodes a protein with a conserved N-terminal FORWARD domain. |journal=Biochim. Biophys. Acta |volume=1599 |issue= 1-2 |pages= 152–5 |year= 2003 |pmid= 12479417 |doi=  }}
-*{{cite journal  | author=Scherer SW, Cheung J, MacDonald JR, ''et al.'' |title=Human chromosome 7: DNA sequence and biology. |journal=Science |volume=300 |issue= 5620 |pages= 767-72 |year= 2003 |pmid= 12690205 |doi= 10.1126/science.1083423 }}
+*{{cite journal  | author=Scherer SW, Cheung J, MacDonald JR, ''et al.'' |title=Human chromosome 7: DNA sequence and biology. |journal=Science |volume=300 |issue= 5620 |pages= 767–72 |year= 2003 |pmid= 12690205 |doi= 10.1126/science.1083423 }}
-*{{cite journal  | author=Hillier LW, Fulton RS, Fulton LA, ''et al.'' |title=The DNA sequence of human chromosome 7. |journal=Nature |volume=424 |issue= 6945 |pages= 157-64 |year= 2003 |pmid= 12853948 |doi= 10.1038/nature01782 }}
+*{{cite journal  | author=Hillier LW, Fulton RS, Fulton LA, ''et al.'' |title=The DNA sequence of human chromosome 7. |journal=Nature |volume=424 |issue= 6945 |pages= 157–64 |year= 2003 |pmid= 12853948 |doi= 10.1038/nature01782 }}
-*{{cite journal  | author=Gerhard DS, Wagner L, Feingold EA, ''et al.'' |title=The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). |journal=Genome Res. |volume=14 |issue= 10B |pages= 2121-7 |year= 2004 |pmid= 15489334 |doi= 10.1101/gr.2596504 }}
+*{{cite journal  | author=Gerhard DS, Wagner L, Feingold EA, ''et al.'' |title=The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). |journal=Genome Res. |volume=14 |issue= 10B |pages= 2121–7 |year= 2004 |pmid= 15489334 |doi= 10.1101/gr.2596504 }}
-*{{cite journal  | author=Pocernich CB, Poon HF, Boyd-Kimball D, ''et al.'' |title=Proteomic analysis of oxidatively modified proteins induced by the mitochondrial toxin 3-nitropropionic acid in human astrocytes expressing the HIV protein tat. |journal=Brain Res. Mol. Brain Res. |volume=133 |issue= 2 |pages= 299-306 |year= 2005 |pmid= 15710247 |doi= 10.1016/j.molbrainres.2004.10.024 }}
+*{{cite journal  | author=Pocernich CB, Poon HF, Boyd-Kimball D, ''et al.'' |title=Proteomic analysis of oxidatively modified proteins induced by the mitochondrial toxin 3-nitropropionic acid in human astrocytes expressing the HIV protein tat. |journal=Brain Res. Mol. Brain Res. |volume=133 |issue= 2 |pages= 299–306 |year= 2005 |pmid= 15710247 |doi= 10.1016/j.molbrainres.2004.10.024 }}
 }}
 {{refend}}

Revision as of 10:29, 11 June 2008

References

Further reading