Atlantogenata: Difference between revisions

Atlantogenata; Temporal range: Paleocene–Recent PreꞒ Ꞓ O S D C P T J K Pg N
Scientific classification
Domain:	Eukaryota
Kingdom:	Animalia
Phylum:	Chordata
Class:	Mammalia
Infraclass:	Placentalia
Clade:	Atlantogenata; Waddell et al, 1999
Subgroups
	Superorder Afrotheria: Clade Afroinsectiphilia; Clade Paenungulata; ; Superorder Xenarthra: Order Cingulata (Armadillos); Order Pilosa (Anteaters, sloths); ;

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Atlantogenata is a proposed clade of placental mammals containing the cohorts or superorders Xenarthra and Afrotheria.^[1] These groups originated and radiated in the South American and African continents, respectively, presumably in the Cretaceous. Together with Boreoeutheria, they make up Eutheria. The monophyly of this grouping is supported by some genetic evidence.^[2]^[3]

Alternative hypotheses are that Boreoeutheria and Afrotheria combine to form Epitheria (as generally supported by anatomical and other physiological evidence) or that Boreoeutheria and Xenarthra combine to form Exafroplacentalia or Notolegia.^[4]

Updated analysis of transposable element insertions around the time of divergence strongly supports the fourth hypothesis of a near-concomitant origin (trifurcation) of the three superorders of mammals: Afrotheria, Boreoeutheria, and Xenarthra.^[5]^[6]

Eutheria

Atlantogenata

	Xenarthra

	Afrotheria

Boreoeutheria

	Laurasiatheria

	Euarchontoglires

Below shows the phylogeny of the extant atlantogenate families.

References

^ ^a ^b Waddell, Peter J.; Cao, Ying; Hasegawa, Masami; Mindell, David P. (1999). "Assessing the Cretaceous Superordinal Divergence Times within Birds and Placental Mammals by Using Whole Mitochondrial Protein Sequences and an Extended Statistical Framework". Systematic Biology. 48 (1): 119–137. doi:10.1080/106351599260481. PMID 12078636.
^ Waddell, Peter J.; Okada, Norohiro; Hasegawa, Masami (1999). "Towards Resolving the Interordinal Relationships of Placental Mammals". Systematic Biology. 48 (1): 1–5. doi:10.1093/sysbio/48.1.1. PMID 12078634.
^ Murphy, W.J.; Pringle, T.H.; Crider, T.A.; Springer, M.S.; Miller, W. (2007). "Using genomic data to unravel the root of the placental mammal phylogeny". Genome Research. 17 (4): 413–421. doi:10.1101/gr.5918807. PMC 1832088. PMID 17322288.
^ Wildman, Derek E.; Chen, Caoyi; Erez, Offer; Grossman, Lawrence I.; Goodman, Morris; Romero, Roberto (2006). "Evolution of the mammalian placenta revealed by phylogenetic analysis". Proceedings of the National Academy of Sciences. 103 (9): 3203–3208. Bibcode:2006PNAS..103.3203W. doi:10.1073/pnas.0511344103. PMC 1413940. PMID 16492730.
^ Nishihara, H.; Maruyama, S.; Okada, N. (2009). "Retroposon analysis and recent geological data suggest near-simultaneous divergence of the three superorders of mammals". Proceedings of the National Academy of Sciences. 106 (13): 5235–40. Bibcode:2009PNAS..106.5235N. doi:10.1073/pnas.0809297106. PMC 2655268. PMID 19286970.
^ Churakov, G.; Kriegs, J. O.; Baertsch, R.; Zemann, A.; Brosius, J. R.; Schmitz, J. R. (2009). "Mosaic retroposon insertion patterns in placental mammals". Genome Research. 19 (5): 868–875. doi:10.1101/gr.090647.108. PMC 2675975. PMID 19261842.

Nikolaev, Sergey; Montoya-Burgos, Juan I.; Margulies, Elliott H.; NISC Comparative Sequencing Program; Rougemont, Jacques; Nyffeler, Bruno; Antonarakis, Stylianos E. (2007). "Early History of Mammals is Elucidated with the ENCODE Multiple Species Sequencing Data". PLoS Genetics. 3 (1): e2. doi:10.1371/journal.pgen.0030002. PMC 1761045. PMID 17206863.
Springer, Mark S.; Murphy, William J.; Eizirik, Eduardo; O'Brien, Stephen J. (2003). "Placental mammal diversification and the Cretaceous–Tertiary boundary". Proceedings of the National Academy of Sciences. 100 (3): 1056–1061. Bibcode:2003PNAS..100.1056S. doi:10.1073/pnas.0334222100. PMC 298725. PMID 12552136.
Waddell, Peter J.; Kishino, Hirohisa; Ota, Rissa (2001). "A phylogenetic foundation for comparative mammalian genomics". Genome Informatics. 12: 141–154. PMID 11791233. Archived from the original on 2019-07-10. Retrieved 2015-08-27.
Wildman, Derek E.; Chen, Caoyi; Erez, Offer; Grossman, Lawrence I.; Goodman, Morris; Romero, Roberto (2006). "Evolution of the mammalian placenta revealed by phylogenetic analysis". Proceedings of the National Academy of Sciences. 103 (9): 3203–3208. Bibcode:2006PNAS..103.3203W. doi:10.1073/pnas.0511344103. PMC 1413940. PMID 16492730.

This article about a mammal is a stub. You can help Wikipedia by expanding it.

[Waddell1999c-1] Waddell, Peter J.; Cao, Ying; Hasegawa, Masami; Mindell, David P. (1999). "Assessing the Cretaceous Superordinal Divergence Times within Birds and Placental Mammals by Using Whole Mitochondrial Protein Sequences and an Extended Statistical Framework". Systematic Biology. 48 (1): 119–137. doi:10.1080/106351599260481. PMID 12078636.

[2] Waddell, Peter J.; Okada, Norohiro; Hasegawa, Masami (1999). "Towards Resolving the Interordinal Relationships of Placental Mammals". Systematic Biology. 48 (1): 1–5. doi:10.1093/sysbio/48.1.1. PMID 12078634.

[3] Murphy, W.J.; Pringle, T.H.; Crider, T.A.; Springer, M.S.; Miller, W. (2007). "Using genomic data to unravel the root of the placental mammal phylogeny". Genome Research. 17 (4): 413–421. doi:10.1101/gr.5918807. PMC 1832088. PMID 17322288.

[4] Wildman, Derek E.; Chen, Caoyi; Erez, Offer; Grossman, Lawrence I.; Goodman, Morris; Romero, Roberto (2006). "Evolution of the mammalian placenta revealed by phylogenetic analysis". Proceedings of the National Academy of Sciences. 103 (9): 3203–3208. Bibcode:2006PNAS..103.3203W. doi:10.1073/pnas.0511344103. PMC 1413940. PMID 16492730.

[5] Nishihara, H.; Maruyama, S.; Okada, N. (2009). "Retroposon analysis and recent geological data suggest near-simultaneous divergence of the three superorders of mammals". Proceedings of the National Academy of Sciences. 106 (13): 5235–40. Bibcode:2009PNAS..106.5235N. doi:10.1073/pnas.0809297106. PMC 2655268. PMID 19286970.

[6] Churakov, G.; Kriegs, J. O.; Baertsch, R.; Zemann, A.; Brosius, J. R.; Schmitz, J. R. (2009). "Mosaic retroposon insertion patterns in placental mammals". Genome Research. 19 (5): 868–875. doi:10.1101/gr.090647.108. PMC 2675975. PMID 19261842.

[1]

[2]

[3]

[4]

[5]

[6]

@@ Line 1: / Line 1: @@
+{{Short description|Clade of mammals}}
 {{Automatic taxobox
+| fossil_range = {{fossil range|Paleocene|Recent}}
-| name = Atlantogenata
+| image = Atlantogenata.jpg
-| fossil_range = [[Paleocene]] - Recent
-| image = Serengeti_Elefantenbulle.jpg
-| image_caption = [[African bush elephant]] ([[Afrotheria]])
-| image2 = Myresluger2.jpg
-| image2_caption = [[Giant anteater]] ([[Xenarthra]])
 | taxon = Atlantogenata
+| authority = Waddell et al, 1999<ref name="Waddell1999c">{{Cite journal | last1 = Waddell | first1 = Peter J.| last2 = Cao | first2 = Ying | last3 = Hasegawa | first3 = Masami | last4 = Mindell | first4 = David P. | doi = 10.1080/106351599260481 | title = Assessing the Cretaceous Superordinal Divergence Times within Birds and Placental Mammals by Using Whole Mitochondrial Protein Sequences and an Extended Statistical Framework | journal = [[Systematic Biology]] | volume = 48 | issue = 1 | pages = 119–137 | year = 1999| pmid = 12078636| doi-access = free }}</ref>
-| subdivision_ranks = Superorders and Orders
+| subdivision_ranks = Subgroups
-| subdivision =
+| subdivision = *Superorder '''[[Afrotheria]]:'''
-* [[Xenarthra]]
-** [[Pilosa]]
+**''Clade'' [[Afroinsectiphilia]]
-** [[Cingulata]]
+**''Clade'' [[Paenungulata]]
+*Superorder '''[[Xenarthra]]:'''
-* [[Afrotheria]]
+**Order [[Cingulata]] (Armadillos)
-** [[Afrosoricida]]
+**Order [[Pilosa]] (Anteaters, sloths)
-** [[Macroscelidea]]
-** [[Tubulidentata]]
-** †[[Bibymalagasia]]
-** †[[Afredentata]]
-** [[Hyracoidea]]
-** [[Proboscidea]]
-** [[Sirenia]]
-** †[[Embrithopoda]]
-** †[[Desmostylia]]
-<br/>''See text for more details''
 }}
-'''Atlantogenata''' is a proposed [[clade]] of [[mammal]]s containing the cohorts or superorders [[Afrotheria]] and [[Xenarthra]].  These groups originated and radiated in the [[South America]]n and [[Africa]]n continents, presumably in the [[Cretaceous]]. Together with [[Boreoeutheria]], they make up [[Eutheria]]. The [[monophyly]] of this grouping was supported by some genetic evidence.<ref>{{Cite journal | last1 = Waddell | first1 = Peter J.| last2 = Okada | first2 = Norohiro| last3 = Hasegawa | first3 = Masami| doi = 10.1093/sysbio/48.1.1 | title = Towards Resolving the Interordinal Relationships of Placental Mammals | journal = [[Systematic Biology]] | volume = 48 | issue = 1 | pages = 1–5 | year = 1999 | pmid = 12078634| pmc = }}</ref><ref>{{cite journal | last1 = Murphy | first1 = W.J. | last2 = Pringle | first2 = T.H. | last3 = Crider | first3 = T.A. | last4 = Springer | first4 = M.S. | last5 = Miller | first5 = W. | year = 2007 | title = Using genomic data to unravel the root of the placental mammal phylogeny | journal = [[Genome Research]] | volume = 17 | issue = | pages = 413–421 | doi=10.1101/gr.5918807 | pmid=17322288 | pmc=1832088}}</ref>
+'''Atlantogenata''' is a proposed [[clade]] of [[Placentalia|placental mammal]]s containing the cohorts or superorders [[Xenarthra]] and [[Afrotheria]].<ref name="Waddell1999c" />  These groups originated and radiated in the [[South America]]n and [[Africa]]n continents, respectively, presumably in the [[Cretaceous]]. Together with [[Boreoeutheria]], they make up [[Eutheria]]. The [[monophyly]] of this grouping is supported by some genetic evidence.<ref>{{Cite journal | last1 = Waddell | first1 = Peter J.| last2 = Okada | first2 = Norohiro| last3 = Hasegawa | first3 = Masami| doi = 10.1093/sysbio/48.1.1 | title = Towards Resolving the Interordinal Relationships of Placental Mammals | journal = [[Systematic Biology]] | volume = 48 | issue = 1 | pages = 1–5 | year = 1999 | pmid = 12078634| doi-access = free }}</ref><ref>{{cite journal | last1 = Murphy | first1 = W.J. | last2 = Pringle | first2 = T.H. | last3 = Crider | first3 = T.A. | last4 = Springer | first4 = M.S. | last5 = Miller | first5 = W. | year = 2007 | title = Using genomic data to unravel the root of the placental mammal phylogeny | journal = [[Genome Research]] | volume = 17 | issue = 4| pages = 413–421 | doi=10.1101/gr.5918807 | pmid=17322288 | pmc=1832088}}</ref>
-Alternative hypotheses are that Boreoeutheria and Afrotheria combine to form [[Epitheria]] (as generally supported by anatomical and other physiological evidence) or that Boreoeutheria and Xenarthra combine to form [[Exafroplacentalia]] or [[Notolegia]].<ref>{{Cite journal | last1 = Wildman | first1 = Derek E.| last2 = Chen | first2 = Caoyi| last3 = Erez | first3 = Offer| last4 = Grossman | first4 = Lawrence I.| last5 = Goodman | first5 = Morris| last6 = Romero | first6 = Roberto| title = Evolution of the mammalian placenta revealed by phylogenetic analysis | doi = 10.1073/pnas.0511344103 | journal = [[Proceedings of the National Academy of Sciences of the United States of America|Proceedings of the National Academy of Sciences]]| volume = 103 | issue = 9 | pages = 3203–3208 | year = 2006 | pmid = 16492730| pmc = 1413940}}</ref>
+Alternative hypotheses are that Boreoeutheria and Afrotheria combine to form [[Epitheria]] (as generally supported by anatomical and other physiological evidence) or that Boreoeutheria and Xenarthra combine to form [[Exafroplacentalia]] or [[Notolegia]].<ref>{{Cite journal | last1 = Wildman | first1 = Derek E.| last2 = Chen | first2 = Caoyi| last3 = Erez | first3 = Offer| last4 = Grossman | first4 = Lawrence I.| last5 = Goodman | first5 = Morris| last6 = Romero | first6 = Roberto| title = Evolution of the mammalian placenta revealed by phylogenetic analysis | doi = 10.1073/pnas.0511344103 | journal = [[Proceedings of the National Academy of Sciences of the United States of America|Proceedings of the National Academy of Sciences]]| volume = 103 | issue = 9 | pages = 3203–3208 | year = 2006 | pmid = 16492730| pmc = 1413940| bibcode = 2006PNAS..103.3203W| doi-access = free}}</ref>
-Updated analysis of [[transposable element]] insertions around the time of divergence strongly supports the fourth hypothesis of a near-concomitant origin (trifurcation) of the three superorders of mammals.<ref>{{Cite journal | last1 = Nishihara | first1 = H. | last2 = Maruyama | first2 = S. | last3 = Okada | first3 = N. | doi = 10.1073/pnas.0809297106 | title = Retroposon analysis and recent geological data suggest near-simultaneous divergence of the three superorders of mammals | journal = Proceedings of the National Academy of Sciences | volume = 106 | issue = 13 | pages = 5235 | year = 2009 | pmid =  19286970| pmc = 2655268}}</ref><ref>{{Cite journal | last1 = Churakov | first1 = G.| last2 = Kriegs | first2 = J. O.| last3 = Baertsch | first3 = R.| last4 = Zemann | first4 = A.| last5 = Brosius | first5 = J. R.| last6 = Schmitz | first6 = J. R.| doi = 10.1101/gr.090647.108 | title = Mosaic retroposon insertion patterns in placental mammals | journal = [[Genome Research]]| volume = 19 | issue = 5 | pages = 868–875 | year = 2009 | pmid = 19261842| pmc = 2675975}}</ref>
+Updated analysis of [[transposable element]] insertions around the time of divergence strongly supports the fourth hypothesis of a near-concomitant origin (trifurcation) of the three superorders of mammals: Afrotheria, Boreoeutheria, and Xenarthra.<ref>{{Cite journal | last1 = Nishihara | first1 = H. | last2 = Maruyama | first2 = S. | last3 = Okada | first3 = N. | doi = 10.1073/pnas.0809297106 | title = Retroposon analysis and recent geological data suggest near-simultaneous divergence of the three superorders of mammals | journal = Proceedings of the National Academy of Sciences | volume = 106 | issue = 13 | pages = 5235–40 | year = 2009 | pmid =  19286970| pmc = 2655268| bibcode = 2009PNAS..106.5235N | doi-access = free }}</ref><ref>{{Cite journal | last1 = Churakov | first1 = G.| last2 = Kriegs | first2 = J. O.| last3 = Baertsch | first3 = R.| last4 = Zemann | first4 = A.| last5 = Brosius | first5 = J. R.| last6 = Schmitz | first6 = J. R.| doi = 10.1101/gr.090647.108 | title = Mosaic retroposon insertion patterns in placental mammals | journal = [[Genome Research]]| volume = 19 | issue = 5 | pages = 868–875 | year = 2009 | pmid = 19261842| pmc = 2675975}}</ref>
 {{clade
 |label1=Eutheria&nbsp;&nbsp;
 |1={{clade
+|label1=&nbsp;&nbsp;Atlantogenata&nbsp;&nbsp;
-    |label1=[[Boreoeutheria]]
     |1={{clade
-       |1=[[Euarchontoglires]]
-       |2=[[Laurasiatheria]]}}
-    |label2=&nbsp;&nbsp;Atlantogenata&nbsp;&nbsp;
-    |2={{clade
        |1=[[Xenarthra]]
-       |2=[[Afrotheria]]&nbsp;&nbsp;
+       |2=[[Afrotheria]]
+}}
+    |label2=[[Boreoeutheria]]
+    |2={{clade
+       |1=[[Laurasiatheria]]&nbsp;&nbsp;
+       |2=[[Euarchontoglires]]
         }}
      }}
@@ Line 69: / Line 57: @@
           |2={{Clade
               |1=[[Three-toed sloth|Bradypodidae]]
-              |2=[[Megalonychidae]] }} }} }}
+              |2=[[Two-toed sloth|Choloepodidae]] }} }} }}
    |label2=[[Afrotheria]]
    |2={{Clade
-      |label1=[[Afroinsectiphilia]]
+      |label1=[[Paenungulata]]
       |1={{Clade
+         |label1=[[Hyrax|Hyracoidea]]
+                    |1=[[Hyrax|Procaviidae]]
+         |label2=[[Tethytheria]]
+         |2={{Clade
+             |label1=[[Sirenia]]
+             |1={{Clade
+                |1=[[Trichechidae]]
+                |2=[[Dugongidae]]
+             }}
+             |label2=[[Proboscidea]]
+             |2=[[Elephantidae]]
+ }} }}
+      |label2=[[Afroinsectiphilia]]
+      |2={{Clade
          |label1=[[Tubulidentata]]
                     |1=[[Orycteropodidae]]
@@ Line 85: / Line 87: @@
                          |2=[[Tenrecidae]]
       }} }} }}
+ }} }} }}
-      |label2=[[Paenungulata]]
-      |2={{Clade
-         |label1=[[Hyrax|Hyracoidea]]
-                    |1=[[Hyrax|Procaviidae]]
-         |label2=[[Tethytheria]]
-         |2={{Clade
-             |label1=[[Proboscidea]]
-                        |1=[[Elephantidae]]
-             |label2=[[Sirenia]]
-                         |2={{Clade
-                             |1=[[Dugongidae]]
-                             |2=[[Trichechidae]]
-         }} }} }} }} }} }}
 ==References==
-{{reflist}}
+{{Reflist}}
 ===Further reading===
 {{refbegin}}
-* {{Cite journal | last1 = Nikolaev | first1 = Sergey| last2 = Montoya-Burgos | first2 = Juan I.| last3 = Margulies | first3 = Elliott H.| author4 = NISC Comparative Sequencing Program| last5 = Rougemont | first5 = Jacques| last6 = Nyffeler | first6 = Bruno| last7 = Antonarakis | first7 = Stylianos E.| doi = 10.1371/journal.pgen.0030002 | title = Early History of Mammals is Elucidated with the ENCODE Multiple Species Sequencing Data | journal = [[PLOS Genetics|PLoS Genetics]]| volume = 3 | issue = 1 | pages = e2 | year = 2007 | pmid = 17206863| pmc = 1761045}}
+* {{Cite journal | last1 = Nikolaev | first1 = Sergey| last2 = Montoya-Burgos | first2 = Juan I.| last3 = Margulies | first3 = Elliott H.| author4 = NISC Comparative Sequencing Program| last5 = Rougemont | first5 = Jacques| last6 = Nyffeler | first6 = Bruno| last7 = Antonarakis | first7 = Stylianos E.| doi = 10.1371/journal.pgen.0030002 | title = Early History of Mammals is Elucidated with the ENCODE Multiple Species Sequencing Data | journal = [[PLOS Genetics|PLoS Genetics]]| volume = 3 | issue = 1 | pages = e2 | year = 2007 | pmid = 17206863| pmc = 1761045| doi-access = free}}
-* {{Cite journal | last1 = Springer | first1 = Mark S.| last2 = Murphy | first2 = William J.| last3 = Eizirik | first3 = Eduardo| last4 = O'Brien | first4 = Stephen J.| title = Placental mammal diversification and the Cretaceous–Tertiary boundary | doi = 10.1073/pnas.0334222100 | journal = [[Proceedings of the National Academy of Sciences of the United States of America|Proceedings of the National Academy of Sciences]]| volume = 100 | issue = 3 | pages = 1056–1061 | year = 2003 | pmid = 12552136| pmc = 298725}}
+* {{Cite journal | last1 = Springer | first1 = Mark S.| last2 = Murphy | first2 = William J.| last3 = Eizirik | first3 = Eduardo| last4 = O'Brien | first4 = Stephen J.| title = Placental mammal diversification and the Cretaceous–Tertiary boundary | doi = 10.1073/pnas.0334222100 | journal = [[Proceedings of the National Academy of Sciences of the United States of America|Proceedings of the National Academy of Sciences]]| volume = 100 | issue = 3 | pages = 1056–1061 | year = 2003 | pmid = 12552136| pmc = 298725| bibcode = 2003PNAS..100.1056S| doi-access = free}}
 * {{Cite journal
-| last1 = Waddell | first1 = Peter J.
+| last1 = Waddell
+| first1 = Peter J.
-| last2 = Kishino | first2 = Hirohisa
+| last2 = Kishino
+| first2 = Hirohisa
-| last3 = Ota | first3 = Rissa
+| last3 = Ota
+| first3 = Rissa
 | title = A phylogenetic foundation for comparative mammalian genomics
 | journal = [[Genome Informatics]]
 | volume = 12
 | pages = 141–154
 | year = 2001
 | pmid = 11791233
 | url = http://www.jsbi.org/pdfs/journal1/GIW01/GIW01F15.html
+| access-date = 2015-08-27
+| archive-date = 2019-07-10
+| archive-url = https://web.archive.org/web/20190710063147/https://www.jsbi.org/pdfs/journal1/GIW01/GIW01F15.html
+| url-status = dead
 }}
-* {{Cite journal | last1 = Wildman | first1 = Derek E.| last2 = Chen | first2 = Caoyi| last3 = Erez | first3 = Offer| last4 = Grossman | first4 = Lawrence I.| last5 = Goodman | first5 = Morris| last6 = Romero | first6 = Roberto| title = Evolution of the mammalian placenta revealed by phylogenetic analysis | doi = 10.1073/pnas.0511344103 | journal = [[Proceedings of the National Academy of Sciences of the United States of America|Proceedings of the National Academy of Sciences]]| volume = 103 | issue = 9 | pages = 3203–3208 | year = 2006 | pmid = 16492730| pmc = 1413940}}
+* {{Cite journal | last1 = Wildman | first1 = Derek E.| last2 = Chen | first2 = Caoyi| last3 = Erez | first3 = Offer| last4 = Grossman | first4 = Lawrence I.| last5 = Goodman | first5 = Morris| last6 = Romero | first6 = Roberto| title = Evolution of the mammalian placenta revealed by phylogenetic analysis | doi = 10.1073/pnas.0511344103 | journal = [[Proceedings of the National Academy of Sciences of the United States of America|Proceedings of the National Academy of Sciences]]| volume = 103 | issue = 9 | pages = 3203–3208 | year = 2006 | pmid = 16492730| pmc = 1413940| bibcode = 2006PNAS..103.3203W| doi-access = free}}
 {{refend}}
 {{Mammals}}
+{{Taxonbar|from=Q2718670}}
+[[Category:Atlantogenata| ]]
+[[Category:Eutheria]]
 [[Category:Mammal unranked clades]]
 [[Category:Extant Paleocene first appearances]]