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ORCIDJesper Ferkinghoff-Borg
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2020 – today
- 2022
[j12]Lisbeth Ravnkilde Kjølbye
, Lars Sørensen, Jun Yan, Nils A. Berglund, Jesper Ferkinghoff-Borg, Carol V. Robinson, Birgit Schiøtt:
Lipid Modulation of a Class B GPCR: Elucidating the Modulatory Role of PI(4, 5)P2 Lipids. J. Chem. Inf. Model. 62(24): 6788-6802 (2022)- [i1]Yevgen Zainchkovskyy, Jesper Ferkinghoff-Borg, Anja Bennett, Thomas Egebjerg, Nikolai Lorenzen, Per Greisen Jr., Søren Hauberg, Carsten Stahlhut:
Probabilistic thermal stability prediction through sparsity promoting transformer representation. CoRR abs/2211.05698 (2022) - 2021
- [j11]Lisbeth Ravnkilde Kjølbye, Leonardo De Maria, Tsjerk A. Wassenaar, Haleh Abdizadeh, Siewert J. Marrink, Jesper Ferkinghoff-Borg, Birgit Schiøtt:
General Protocol for Constructing Molecular Models of Nanodiscs. J. Chem. Inf. Model. 61(6): 2869-2883 (2021)
2010 – 2019
- 2018
- [j10]Mathias Engel, James Longden, Jesper Ferkinghoff-Borg, Xavier Robin, Gaye Saginc, Rune Linding:
Bowhead: Bayesian modelling of cell velocity during concerted cell migration. PLoS Comput. Biol. 14(1) (2018) - 2016
- [c1]Jes Frellsen, Ole Winther, Zoubin Ghahramani, Jesper Ferkinghoff-Borg:
Bayesian Generalised Ensemble Markov Chain Monte Carlo. AISTATS 2016: 408-416 - 2015
- [j9]Christian Garde, Martin Welch, Jesper Ferkinghoff-Borg, Thomas Sams:
Microbial Biofilm as a Smart Material. Sensors 15(2): 4229-4241 (2015) - 2014
- [j8]Wouter Boomsma, Jesper Ferkinghoff-Borg, Kresten Lindorff-Larsen:
Combining Experiments and Simulations Using the Maximum Entropy Principle. PLoS Comput. Biol. 10(2) (2014) - 2013
- [j7]Wouter Boomsma, Jes Frellsen, Tim Harder, Sandro Bottaro, Kristoffer E. Johansson, Pengfei Tian, Kasper Stovgaard, Christian Andreetta, Simon Olsson, Jan B. Valentin, Lubomir D. Antonov, Anders S. Christensen, Mikael Borg, Jan H. Jensen, Kresten Lindorff-Larsen, Jesper Ferkinghoff-Borg, Thomas Hamelryck:
PHAISTOS: A framework for Markov chain Monte Carlo simulation and inference of protein structure. J. Comput. Chem. 34(19): 1697-1705 (2013) - 2010
- [j6]Kasper Stovgaard, Christian Andreetta, Jesper Ferkinghoff-Borg, Thomas Hamelryck:
Calculation of accurate small angle X-ray scattering curves from coarse-grained protein models. BMC Bioinform. 11: 429 (2010)
2000 – 2009
- 2009
- [j5]Tom Lenaerts, Jesper Ferkinghoff-Borg, Joost Schymkowitz, Frederic Rousseau:
Information theoretical quantification of cooperativity in signalling complexes. BMC Syst. Biol. 3: 9 (2009) - [j4]Jes Frellsen, Ida Moltke, Martin Thiim, Kanti V. Mardia, Jesper Ferkinghoff-Borg, Thomas Hamelryck:
A Probabilistic Model of RNA Conformational Space. PLoS Comput. Biol. 5(6) (2009) - 2008
- [j3]Ignacio E. Sánchez, Pedro Beltrão, Francois Stricher, Joost Schymkowitz, Jesper Ferkinghoff-Borg, Frederic Rousseau, Luis Serrano:
Genome-Wide Prediction of SH2 Domain Targets Using Structural Information and the FoldX Algorithm. PLoS Comput. Biol. 4(4) (2008) - 2005
- [j2]Joke Reumers, Joost Schymkowitz, Jesper Ferkinghoff-Borg, Francois Stricher, Luis Serrano, Frederic Rousseau:
SNPeffect: a database mapping molecular phenotypic effects of human non-synonymous coding SNPs. Nucleic Acids Res. 33(Database-Issue): 527-532 (2005) - [j1]Joost Schymkowitz, Jesper Borg, Francois Stricher, Robby Nys, Frederic Rousseau, Luis Serrano:
The FoldX web server: an online force field. Nucleic Acids Res. 33(Web-Server-Issue): 382-388 (2005)
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