mdqc

Mahalanobis Distance Quality Control for microarrays

MDQC is a multivariate quality assessment method for microarrays based on quality control (QC) reports. The Mahalanobis distance of an array's quality attributes is used to measure the similarity of the quality of that array against the quality of the other arrays. Then, arrays with unusually high distances can be flagged as potentially low-quality.

Author	Justin Harrington
Maintainer	Gabriela Cohen-Freue

To install this package, start R and enter:

    source("http://bioconductor.org/biocLite.R")
    biocLite("mdqc")

Documentation

Package Downloads

Introduction to MDQC

Reference Manual

Package source	mdqc_1.4.0.tar.gz
Windows binary	mdqc_1.4.0.zip
MacOS X 10.4 (Tiger) binary	mdqc_1.4.0.tgz
MacOS X 10.5 (Leopard) binary	mdqc_1.4.0.tgz
Package Downloads Report	Downloads Stats

Details

biocViews
Depends	R , cluster , MASS
Imports
Suggests
System Requirements
License	LGPL version 2 or newer
URL
Depends On Me
Imports Me	arrayMvout
Suggests Me
Development History	Bioconductor Changelog