RpsiXML

R interface to PSI-MI 2.5 files

Queries, data structure and interface to visualization of interaction datasets. This package does not fully inplement the PSI standards currently but will do so in future updates.

Author	Jitao David Zhang , Stefan Wiemann with contributions from Tony Chiang
Maintainer	Jitao David Zhang

To install this package, start R and enter:

    source("http://bioconductor.org/biocLite.R")
    biocLite("RpsiXML")

Documentation

Package Downloads

Reading PSI-25 XML files

Reference Manual

Package source	RpsiXML_1.0.0.tar.gz
Windows binary	RpsiXML_1.0.0.zip
MacOS X 10.4 (Tiger) binary	RpsiXML_1.0.0.tgz
MacOS X 10.5 (Leopard) binary	RpsiXML_1.0.0.tgz
Package Downloads Report	Downloads Stats

Details

biocViews	Infrastructure , Proteomics
Depends	annotate , XML , Biobase , graph , hypergraph , RBGL , methods
Imports
Suggests
System Requirements
License	LGPL-3
URL	http://www.bioconductor.org
Depends On Me	ScISI
Imports Me
Suggests Me
Development History	Bioconductor Changelog