EBImage
Image processing and analysis toolkit for R
The package provides functionality to perform image
processing and image analysis in R. It was originally designed
to support automated image analysis in high throughput
cell-based microscopy assay and is being largerly developed in
that direction. However, the package is of general natuare and
can be used for other problems that require image analysis. The
package supports over 95 image formats through its interface to
ImageMagick and provides functions standard image filters plus
morphological transformations and object detection algroithms.
It has a build-in image viewer which supports single images and
image stacks.
| Author |
Oleg Sklyar, Wolfgang Huber |
| Maintainer |
Oleg Sklyar |
To install this package, start R and enter:
source("http://bioconductor.org/biocLite.R")
biocLite("EBImage")
Vignettes (Documentation)
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Package Downloads
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Details
| biocViews |
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| Depends |
R, methods, utils |
| Suggests |
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| Imports |
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| SystemRequirements |
ImageMagick (> 6.1.7), GTK+ (> 2.6) -- Windows
dependencies are available from the URL below! See package
vignette for installation instructions. |
| License |
LGPL |
| URL |
http://www.ebi.ac.uk/~osklyar/EBImage/
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| dependsOnMe |
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