[Refactor] OutputStructure from Modes to DefaultProtocol

[ferpasri]

Generate, Record, and Replay Mode loops are using the same code to initialize the OutputStructure sequence count.
Move to the generic DefaultProtocol class

TESTAR_dev/testar/src/org/testar/monkey/GenerateMode.java

Lines 74 to 77 in 6007a95

	synchronized(this){
	OutputStructure.calculateInnerLoopDateString();
	OutputStructure.sequenceInnerLoopCount++;
	}